Factsheet for Os03t0201800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92684	Sorghum	endoplasmic reticulum, extracellular, vacuole	63.4	64.51
Os10t0351700-01	Rice	plasma membrane	50.17	50.26
Os03t0201500-01	Rice	vacuole	47.77	48.43
Os03t0201901-00	Rice	cytosol	44.85	45.79
Os10t0351600-00	Rice	cytosol	44.67	44.29
KRH29254	Soybean	cytosol	40.03	41.17
Os03t0243700-01	Rice	cytosol	28.01	40.35
CDY28323	Canola	vacuole	37.8	39.5
Bra034585.1-P	Field mustard	vacuole	38.66	39.27
CDY69164	Canola	vacuole	38.66	39.27
VIT_03s0091g00900.t01	Wine grape	cytosol	37.46	39.14
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	38.49	39.09
AT4G33860.1	Thale cress	plasma membrane, vacuole	38.66	39.06
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	36.6	38.66
VIT_03s0091g00950.t01	Wine grape	cytosol	36.6	38.59
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	37.63	38.49
CDY48434	Canola	vacuole	37.8	38.39
CDY48433	Canola	vacuole	38.14	38.34
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	37.8	38.33
Bra034584.1-P	Field mustard	vacuole	37.46	38.05
CDY28325	Canola	vacuole	37.8	38.0
KRH29253	Soybean	extracellular, vacuole	36.94	37.99
AT4G33830.1	Thale cress	vacuole	37.46	37.85
Solyc01g106990.1.1	Tomato	vacuole	37.46	37.78
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	37.63	37.44
AT4G33840.1	Thale cress	vacuole	36.94	37.33
VIT_03s0091g00880.t01	Wine grape	vacuole	38.14	37.31
CDY49378	Canola	plasma membrane, vacuole	34.71	35.31
PGSC0003DMT400037865	Potato	cytosol	33.51	34.33
Solyc05g051260.2.1	Tomato	golgi, vacuole	33.85	34.14
Os05t0304900-01	Rice	extracellular, vacuole	28.01	33.0
Bra017609.1-P	Field mustard	nucleus	35.57	31.03
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	11.0	28.57
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	17.18	27.17
CDX72434	Canola	cytosol, vacuole	35.57	23.6
Os01t0134900-01	Rice	extracellular	21.99	22.98
GSMUA_Achr1P12520_001	Banana	mitochondrion	35.74	22.71
GSMUA_Achr1P12510_001	Banana	cytosol	35.22	21.4
Solyc01g106980.1.1	Tomato	cytosol	37.29	19.66
Os03t0672900-00	Rice	extracellular	24.91	19.18
Os07t0456700-01	Rice	plasma membrane	25.09	13.26

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	EntrezGene:4331977	ProteinID:ABF94507.1	EMBL:AK105496	ProteinID:BAF11214.1
ProteinID:BAS82828.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	EnsemblPlantsGene:Os03g0201800
EnsemblPlants:Os03t0201800-01	PFAM:PF00331	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF10	UniProt:Q10QC3
SMART:SM00633	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0000DB4137	:	:

Description

Similar to Tapetum specific protein (Tapetum-specific endoxylanase). (Os03t0201800-01);Similar to Glycosyl hydrolase family 10 protein, expressed. (Os03t0201800-02)

Coordinates

chr3:-:5326713..5330590

Molecular Weight (calculated)

65550.6 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.401

Length

582 amino acids

Sequence
(BLAST)

001: MKVFTGKLVF FLAIILFEGC LVRSQSVPYD YSANIECVKE PEKPLYGGGI LKETEAKGYA SGKKLLSENS KSAAPVKGSA LKVDLKKDHH YALSVWLQLS
101: KGEGDIRAVL VTPDGKFNTA GMIAAKCGCW TMLKGGATSY DDGKGDIFFE TNVTAEVMAE GMALQPFSFD EWKGHRAESV KKERMKKVKI TVVGPDGKPV
201: PEADVSLERV GKGFPLGNAM TKEILDMPEY EKWFAARFRY ATLENEMKWY STEFHQNEED YKVSDKMVEL AEKHNITLRG HNVFWDDQDK QMDWVEKLGV
301: PELKEAMAKR LKDIVTRYAG KVIHWDVVNE NLHFNFFEGK LGKDASAEIF RDVAKLDSKP ILFMNEFNTI EEPNDAAPLP TKYVAKLKQI REFPGNADLK
401: YGIGLESHFA APNIPYMRGS IDTLAQAKVP IWLTEVDVKP CKNQVEYLDE VMREGFAHPA VKGIVLWGAW HAKGCYVMCF TDNSFKNLPV GDAIDKLLKE
501: WTAGHTGKTD SKGVLEVEIF HGEYNATVKH KEFKENCMTL DLDSKAEAKI ELRSDKVLTP WVELKYPNRH LGLHRSQESG CS

Best Arabidopsis Sequence Match ( AT4G33860.1 )
(BLAST)

001: MKRLLLLVVL CSLSLSRCES KVVPYDYSAT IECLEIPLKP QYNGGIIVSP DVRDGTLGWT PFGNAKVDFR KIGNHNFFVA RDRKQPFDSV SQKVYLEKGL
101: LYTFSAWLQV SKGKAPVKAV FKKNGEYKLA GSVVAESKCW SMLKGGLTVD ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ EEWNSHHEQS IQKERKRTVR
201: IRAVNSKGEP IPKATISIEQ RKLGFPFGCE VEKNILGNKA YQNWFTQRFT VTTFANEMKW YSTEVVRGKE DYSTADAMLR FFKQHGVAVR GHNILWNDPK
301: YQPKWVNALS GNDLYNAVKR RVFSVVSRYK GQLAGWDVVN ENLHFSYFED KMGPKASYNI FKMAQAFDPT TTMFMNEYNT LEESSDSDSS LARYLQKLRE
401: IRSIRVCGNI SLGIGLESHF KTPNIPYMRS ALDTLAATGL PIWLTEVDVE APPNVQAKYF EQVLREGHAH PQVKGIVTWS GYSPSGCYRM CLTDGNFKNV
501: PTGDVVDKLL HEWGGFRRQT TGVTDADGYF EASLFHGDYD LKIAHPLTNS KASHSFKLTS DVSSSQNQPS SFVFRV

Arabidopsis Description

Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU9]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.