Factsheet for HORVU5Hr1G106260.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	63.43	44.04
TraesCS5D01G448600.1	Wheat	cytosol	66.76	43.9
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	67.59	43.34
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	65.65	43.25
TraesCS5A01G441400.1	Wheat	cytosol	66.2	43.14
TraesCS5B01G445300.1	Wheat	cytosol	65.65	43.09
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	66.2	42.15
KXG30265	Sorghum	plastid	50.97	28.75
HORVU3Hr1G007460.1	Barley	cytosol	51.52	27.6
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	47.92	24.82
Zm00001d016558_P001	Maize	plastid	29.64	24.77
HORVU4Hr1G003220.3	Barley	cytosol	36.01	17.62
HORVU2Hr1G113150.1	Barley	cytosol	21.05	14.18
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	21.05	13.01
HORVU5Hr1G056740.1	Barley	vacuole	21.33	13.01
HORVU1Hr1G023120.1	Barley	extracellular	19.94	12.52
HORVU2Hr1G021350.12	Barley	mitochondrion	38.23	12.51
HORVU4Hr1G063790.23	Barley	vacuole	19.67	12.5
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	19.67	11.76
HORVU4Hr1G070260.12	Barley	vacuole	19.11	11.29
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	4.99	8.04

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A287SM01	InterPro:CenC_carb-bd	InterPro:GH10
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU5Hr1G106260	EnsemblPlants:HORVU5Hr1G106260.1
InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PFAM:PF02018	PANTHER:PTHR31490	PANTHER:PTHR31490:SF14
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI000B472896	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:623756718..623758834

Molecular Weight (calculated)

38685.7 Da

IEP (calculated)

7.587

GRAVY (calculated)

-0.359

Length

361 amino acids

Sequence
(BLAST)

001: SRTTTXXXXX XXXXXLSVHD EEEMVAVTVG HGGDGNEPSG RYILVSGRAD EKDGLRQVIT GGVLKPGITY RVAGWISLVV AGAASRGTSH PVRVNLGVAM
101: DDDESESLQV ECGAVCAEAG GWTEIMGAFR LMTEQRSAAV YVHGAPAGVD VKVMDLRVVS VDREARFRQL KDKTDKNFKR DVVLKLGAAT GAASVRVVQM
201: DNSFPFGTCI NTTVIQNPAF VDFEHATTWT GPSSRTSSSG TTPRCSRRQL NYADADAFLA LCDRLDKRVR GHCVFWSVEG DVQQWVKSLD KDQLKSAVQS
301: HLEGLVSRYA GNFSHYDVNN EMLHSQFFRD RLGDEDVPAF MFKEVRQRLQ RGMRQRSQRH A

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.