Factsheet for GSMUA_Achr6P33840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g06020.t01	Wine grape	cytosol	83.77	83.27
HORVU3Hr1G085390.1	Barley	cytosol	12.53	82.68
Bra018180.1-P	Field mustard	cytosol	82.1	81.81
CDX86109	Canola	cytosol	82.1	81.81
CDX99080	Canola	cytosol	81.86	81.57
TraesCS3A01G366300.1	Wheat	cytosol	80.79	81.37
KRH46442	Soybean	nucleus	82.1	81.32
TraesCS3D01G359200.1	Wheat	cytosol	80.67	81.25
TraesCS3B01G398000.1	Wheat	cytosol, golgi	80.67	81.25
TraesCS3B01G397900.1	Wheat	cytosol	80.67	81.25
TraesCS3D01G359300.1	Wheat	cytosol	80.55	81.13
EES03893	Sorghum	cytosol	80.91	80.91
KRG98345	Soybean	cytosol, nucleus	81.62	80.85
TraesCS3A01G366400.1	Wheat	cytosol, plastid	80.19	80.77
Os01t0851700-01	Rice	cytosol, nucleus, plasma membrane, plastid	80.79	80.5
AT3G46970.1	Thale cress	cytosol	80.67	80.38
Solyc09g031970.2.1	Tomato	cytosol, nucleus, plastid	79.71	79.81
HORVU2Hr1G012630.6	Barley	mitochondrion, plastid	47.85	79.09
HORVU3Hr1G085420.12	Barley	cytosol	51.91	78.66
HORVU3Hr1G085380.5	Barley	cytosol, plastid	45.7	76.6
Zm00001d042842_P003	Maize	cytosol	81.03	72.31
HORVU3Hr1G085410.1	Barley	plastid	16.47	67.98
HORVU6Hr1G085990.1	Barley	cytosol	4.06	64.15
GSMUA_Achr4P32600_001	Banana	plastid	63.13	57.07

Protein Annotations

KEGG:00500+2.4.1.1	MapMan:3.2.3.5.2	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004645
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008184	GO:GO:0009414
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0016740	GO:GO:0016757	GO:GO:0030170
GO:GO:0046686	GO:GO:0102250	GO:GO:0102499	EnsemblPlantsGene:GSMUA_Achr6G33840_001	EnsemblPlants:GSMUA_Achr6P33840_001	EnsemblPlants:GSMUA_Achr6T33840_001
InterPro:Glycg_phsphrylas	InterPro:Glyco_trans_35	UniProt:M0TCH7	PFAM:PF00343	PIRSF:PIRSF000460	ScanProsite:PS00102
PANTHER:PTHR11468	PANTHER:PTHR11468:SF4	InterPro:Pyridoxal_P_attach_site	SUPFAM:SSF53756	TIGRFAMs:TIGR02093	UniParc:UPI000295F14C
SEG:seg	:	:	:	:	:

Description

Alpha-glucan phosphorylase, H isozyme [Source:GMGC_GENE;Acc:GSMUA_Achr6G33840_001]

Coordinates

chr6:+:32775976..32783863

Molecular Weight (calculated)

95101.4 Da

IEP (calculated)

6.480

GRAVY (calculated)

-0.340

Length

838 amino acids

Sequence
(BLAST)

001: MATTKETNAT KVPAIAHPLA EESSEIASNI AYHARYSPHF SPLKFDPEQA YYATAESVLD LLIQRWNETY LHFHRIDPKQ TYYLSMEYLQ GRALTNAIGN
101: LGASGAYADA LNKLGHELEE IVEQEKDAAL GNGGLGRLAS CFLDSMATLN LPAWGYGLRY RYGLFKQRIS KEGQEEVAED WLEKFSPWEV VRHDVVYPIR
201: FFGHVEISPT GSRKWVGGEI IQALAYDVPI PGYKTKNTIS LRLWEAKASA EDFNLFQFNE GQYESASQLH SRAQQICAVL YPGDATENGK MLRLKQQFFL
301: CSASLQDIIM RFKERRSGNM TWKWSEFPSK VAVQLNDTHP TLAIPELMRL LMDDEGLGWD EAWDVTTRTV AYTNHTVLPE ALEKWPQAIM YKLLPRHMEI
401: IEEIDKRFMA MIRSSLNGME SKLPAMQILD SSNPLKPVVR MANLCVVSSH TVNGVAQLHS DILKSELFAD FFSIWPTKFQ NKTNGITPRR WIRFCSPELS
501: DIITKWLKTD EWITNFDLLS GLRQFAGNEE LHAEWASAKM ANKQRLAQYV LHVTGVTIDP NSLFDIQVKR IHEYKRQLLN ILGTVYRYKK LKEMTVEERN
601: KMTSRTVMIG GKAFSTYTNA KRIVKLVNDV GAVVNNDPEV NNYLKVVFIP NYNVSVAEIL IPGSELSQHI STAGMEASGT SNMKFSLNGC IIIGTLDGAN
701: VEIREEIGED NFFLFGAKAD EVPRLRKERE KGLFNPDPRF EEAKQFIRSG AFGSYDYNPL LDSLEGNSGY GRGDYFLVGH DFPSYIEAQS SVDEAYKDRR
801: RWLKMSILST AGSGKFSSDR TISQYAKDIW DITACPVP

Best Arabidopsis Sequence Match ( AT3G46970.1 )
(BLAST)

001: MANANGKAAT SLPEKISAKA NPEADDATEI AGNIVYHAKY SPHFSPLKFG PEQALYATAE SLRDRLIQLW NETYVHFNKV DPKQTYYLSM EYLQGRALTN
101: AIGNLNLQGP YADALRTLGY ELEEIAEQEK DAALGNGGLG RLASCFLDSM ATLNLPAWGY GLRYRHGLFK QIITKKGQEE IPEDWLEKFS PWEIVRHDVV
201: FPVRFFGKVQ VNPDGSRKWV DGDVVQALAY DVPIPGYGTK NTISLRLWEA KARAEDLDLF QFNEGEYELA AQLHSRAQQI CTVLYPGDAT ENGKLLRLKQ
301: QFFLCSASLQ DIISRFHERS TTEGSRKWSE FPSKVAVQMN DTHPTLAIPE LMRLLMDDNG LGWDEAWDVT SKTVAYTNHT VLPEALEKWS QSLMWKLLPR
401: HMEIIEEIDK RFVQTIRDTR VDLEDKISSL SILDNNPQKP VVRMANLCVV SSHTVNGVAQ LHSDILKAEL FADYVSIWPN KFQNKTNGIT PRRWLRFCSP
501: ELSDIITKWL KTDKWITDLD LLTGLRQFAD NEELQSEWAS AKTANKKRLA QYIERVTGVS IDPTSLFDIQ VKRIHEYKRQ LMNILGVVYR FKKLKEMKPE
601: ERKKTVPRTV MIGGKAFATY TNAKRIVKLV NDVGDVVNSD PEVNEYLKVV FVPNYNVTVA EMLIPGSELS QHISTAGMEA SGTSNMKFAL NGCLIIGTLD
701: GANVEIREEV GEENFFLFGA TADQVPRLRK EREDGLFKPD PRFEEAKQFV KSGVFGSYDY GPLLDSLEGN TGFGRGDYFL VGYDFPSYMD AQAKVDEAYK
801: DRKGWLKMSI LSTAGSGKFS SDRTIAQYAK EIWNIEACPV P

Arabidopsis Description

PHS2Alpha-glucan phosphorylase 2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SD76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.