Factsheet for VIT_06s0004g06020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46442	Soybean	nucleus	84.34	84.04
GSMUA_Achr6P33840_001	Banana	cytosol	83.27	83.77
Solyc09g031970.2.1	Tomato	cytosol, nucleus, plastid	83.16	83.75
KRG98345	Soybean	cytosol, nucleus	83.87	83.57
Bra018180.1-P	Field mustard	cytosol	83.16	83.35
CDX86109	Canola	cytosol	83.16	83.35
AT3G46970.1	Thale cress	cytosol	83.16	83.35
CDX99080	Canola	cytosol	83.04	83.23
HORVU3Hr1G085390.1	Barley	cytosol	12.22	81.1
TraesCS3B01G398000.1	Wheat	cytosol, golgi	79.36	80.41
TraesCS3D01G359300.1	Wheat	cytosol	79.12	80.17
TraesCS3D01G359200.1	Wheat	cytosol	79.12	80.17
TraesCS3A01G366300.1	Wheat	cytosol	79.0	80.05
TraesCS3B01G397900.1	Wheat	cytosol	78.88	79.93
Os01t0851700-01	Rice	cytosol, nucleus, plasma membrane, plastid	79.72	79.9
TraesCS3A01G366400.1	Wheat	cytosol, plastid	78.77	79.81
EES03893	Sorghum	cytosol	79.0	79.47
HORVU2Hr1G012630.6	Barley	mitochondrion, plastid	47.45	78.9
HORVU3Hr1G085420.12	Barley	cytosol	51.01	77.76
HORVU3Hr1G085380.5	Barley	cytosol, plastid	45.55	76.8
Zm00001d042842_P003	Maize	cytosol	79.6	71.46
HORVU3Hr1G085410.1	Barley	plastid	16.01	66.5
HORVU6Hr1G085990.1	Barley	cytosol	4.03	64.15
VIT_01s0011g00730.t01	Wine grape	plastid	62.4	53.62
VIT_14s0108g01560.t01	Wine grape	plastid	61.45	52.75
VIT_10s0003g00250.t01	Wine grape	plastid	46.62	39.3

Protein Annotations

KEGG:00500+2.4.1.1	EntrezGene:100251865	wikigene:100251865	MapMan:3.2.3.5.2	Gene3D:3.40.50.2000	ProteinID:CBI16009
ProteinID:CBI16009.3	UniProt:D7SK33	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0004645
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005980	GO:GO:0006091	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0008184	GO:GO:0009056	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	GO:GO:0030170	GO:GO:0031625	GO:GO:0102250	GO:GO:0102499
InterPro:Glycg_phsphrylas	InterPro:Glyco_trans_35	EntrezGene:LOC100251865	wikigene:LOC100251865	PFAM:PF00343	PIRSF:PIRSF000460
ScanProsite:PS00102	PANTHER:PTHR11468	PANTHER:PTHR11468:SF4	InterPro:Pyridoxal_P_attach_site	SUPFAM:SSF53756	TIGR:TC53692
TIGRFAMs:TIGR02093	UniParc:UPI00019836DE	ArrayExpress:VIT_06s0004g06020	EnsemblPlantsGene:VIT_06s0004g06020	EnsemblPlants:VIT_06s0004g06020.t01	unigene:Vvi.321
RefSeq:XP_002280732	RefSeq:XP_002280732.1	SEG:seg	:	:	:

Description

Alpha-1,4 glucan phosphorylase [Source:UniProtKB/TrEMBL;Acc:D7SK33]

Coordinates

chr6:-:6813956..6829322

Molecular Weight (calculated)

95494.7 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.372

Length

843 amino acids

Sequence
(BLAST)

001: MATKKANNGS AAPGIPAEIP AIAHPLAEEP AEIASNINYH VQYSPHFSPF KFEPEQAYYA TAESVRDRLI QQWNDTYVHY HKTDPKQTYY LSMEYLQGRA
101: LTNAIGNLNI QDAYADALNK LGHGLEEIAE QEKDAALGNG GLGRLASCFL DSMATLNLPA WGYGLRYRYG LFKQKITKEG QEEIAEDWLE KFSPWEVVRH
201: DVVFPVRFFG HVAVSPSGSR KWIGGEVMKA LAYDVPIPGY KTKNTISLRL WEAKAGAEDF NLFQFNDGQY EVAAQLHSQA QQICAVLYPG DATESGKLLR
301: LKQQFFLCSA SLQDIIFRFK ERKDGGSWQW SEFPSKVAVQ LNDTHPTLAI PELMRLLMDD EGLAWDEAWD VTSRTIAYTN HTVLPEALEK WSQVVMWKLL
401: PRHMEIIEEI DKRFITMIRS SRTDLESKIP NMCILDNNPQ KPVVRMANLC VVSAHSVNGV AQLHSDILKA ELFADYVSIW PTKFQNKTNG ITPRRWLRFC
501: SPELSNIISK WLKTDEWVTN LDKLANLRKF SDNEEFQAEW ASAKMANKQR LAQYILQVTG ESIDPNSLFD IQVKRIHEYK RQLLNILGAI YRYKKLKEMS
601: PEERKNTTPR TIMIGGKAFA TYTNAKRIVK LVNDVGAVVN TDPEVNEYLK VVFVPNYNVS VAEVLIPGSE LSQHISTAGM EASGTSNMKF ALNGCLIIGT
701: LDGANVEIRE EIGEENFFLF GATADEVPKL RKKREAGLFK PDPRFEEAMQ FIRTGAFGSY DYNPLLESLE GNSGYGRGDY FLVGHDFPGY MDAQARVDEA
801: YKDRKRWLKM SILSTAGSGK FSSDRTIAQY AKEIWNIEEC PVP

Best Arabidopsis Sequence Match ( AT3G46970.1 )
(BLAST)

001: MANANGKAAT SLPEKISAKA NPEADDATEI AGNIVYHAKY SPHFSPLKFG PEQALYATAE SLRDRLIQLW NETYVHFNKV DPKQTYYLSM EYLQGRALTN
101: AIGNLNLQGP YADALRTLGY ELEEIAEQEK DAALGNGGLG RLASCFLDSM ATLNLPAWGY GLRYRHGLFK QIITKKGQEE IPEDWLEKFS PWEIVRHDVV
201: FPVRFFGKVQ VNPDGSRKWV DGDVVQALAY DVPIPGYGTK NTISLRLWEA KARAEDLDLF QFNEGEYELA AQLHSRAQQI CTVLYPGDAT ENGKLLRLKQ
301: QFFLCSASLQ DIISRFHERS TTEGSRKWSE FPSKVAVQMN DTHPTLAIPE LMRLLMDDNG LGWDEAWDVT SKTVAYTNHT VLPEALEKWS QSLMWKLLPR
401: HMEIIEEIDK RFVQTIRDTR VDLEDKISSL SILDNNPQKP VVRMANLCVV SSHTVNGVAQ LHSDILKAEL FADYVSIWPN KFQNKTNGIT PRRWLRFCSP
501: ELSDIITKWL KTDKWITDLD LLTGLRQFAD NEELQSEWAS AKTANKKRLA QYIERVTGVS IDPTSLFDIQ VKRIHEYKRQ LMNILGVVYR FKKLKEMKPE
601: ERKKTVPRTV MIGGKAFATY TNAKRIVKLV NDVGDVVNSD PEVNEYLKVV FVPNYNVTVA EMLIPGSELS QHISTAGMEA SGTSNMKFAL NGCLIIGTLD
701: GANVEIREEV GEENFFLFGA TADQVPRLRK EREDGLFKPD PRFEEAKQFV KSGVFGSYDY GPLLDSLEGN TGFGRGDYFL VGYDFPSYMD AQAKVDEAYK
801: DRKGWLKMSI LSTAGSGKFS SDRTIAQYAK EIWNIEACPV P

Arabidopsis Description

PHS2Alpha-glucan phosphorylase 2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SD76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.