Factsheet for Os01t0851700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 26035336
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G397900.1	Wheat	cytosol	92.15	93.15
TraesCS3A01G366300.1	Wheat	cytosol	92.03	93.03
TraesCS3B01G398000.1	Wheat	cytosol, golgi	91.91	92.91
TraesCS3D01G359300.1	Wheat	cytosol	91.8	92.79
TraesCS3A01G366400.1	Wheat	cytosol, plastid	91.8	92.79
TraesCS3D01G359200.1	Wheat	cytosol	91.56	92.55
EES03893	Sorghum	cytosol	91.44	91.77
HORVU3Hr1G085390.1	Barley	cytosol	13.79	91.34
HORVU2Hr1G012630.6	Barley	mitochondrion, plastid	54.7	90.73
HORVU3Hr1G085420.12	Barley	cytosol	59.45	90.42
HORVU3Hr1G085380.5	Barley	cytosol, plastid	52.32	88.0
Zm00001d042842_P003	Maize	cytosol	91.91	82.32
GSMUA_Achr6P33840_001	Banana	cytosol	80.5	80.79
VIT_06s0004g06020.t01	Wine grape	cytosol	79.9	79.72
Bra018180.1-P	Field mustard	cytosol	79.31	79.31
CDX86109	Canola	cytosol	79.31	79.31
CDX99080	Canola	cytosol	79.19	79.19
AT3G46970.1	Thale cress	cytosol	78.83	78.83
Solyc09g031970.2.1	Tomato	cytosol, nucleus, plastid	77.76	78.14
KRH46442	Soybean	nucleus	78.6	78.13
KRG98345	Soybean	cytosol, nucleus	78.48	78.01
HORVU3Hr1G085410.1	Barley	plastid	18.79	77.83
Os03t0758100-01	Rice	cytosol, plasma membrane, plastid	60.64	57.05

Protein Annotations

KEGG:00500+2.4.1.1	MapMan:3.2.3.5.2	Gene3D:3.40.50.2000	EntrezGene:4324810	EMBL:AK103367	EMBL:AK105410
ProteinID:BAB92854.1	ProteinID:BAF06737.1	ProteinID:BAS75253.1	ProteinID:EAZ14168.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004645	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0005980	GO:GO:0006091	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008184	GO:GO:0009056	GO:GO:0009414	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0030170	GO:GO:0046686
GO:GO:0102250	GO:GO:0102499	InterPro:Glycg_phsphrylas	InterPro:Glyco_trans_35	EnsemblPlantsGene:Os01g0851700	EnsemblPlants:Os01t0851700-01
PFAM:PF00343	PIRSF:PIRSF000460	ScanProsite:PS00102	PANTHER:PTHR11468	PANTHER:PTHR11468:SF4	InterPro:Pyridoxal_P_attach_site
UniProt:Q8LQ33	SUPFAM:SSF53756	TIGRFAMs:TIGR02093	UniParc:UPI00000A433A	RefSeq:XP_015621275.1	SEG:seg

Description

Starch phosphorylase 2, plastidial starch phosphorylase2, plastidial starch phosphorylase 2Similar to Cytosolic starch phosphorylase (Fragment). (Os01t0851700-01)

Coordinates

chr1:-:36670321..36676478

Molecular Weight (calculated)

94475.8 Da

IEP (calculated)

7.266

GRAVY (calculated)

-0.321

Length

841 amino acids

Sequence
(BLAST)

001: MPESNGAACG AAEKVKPAAS PASEEPAAIA GNISFHAQYS PHFSPLAFGP EQAFYSTAES VRDHLVQRWN ETYLHFHKTD PKQTYYLSME YLQGRALTNA
101: VGNLGITGAY AEAVKKFGYE LEALVGQEKD AALGNGGLGR LASCFLDSMA TLNLPAWGYG LRYRYGLFKQ CITKEGQEEI AEDWLEKFSP WEIVRHDIVY
201: PIRFFGHVEI LPDGSRKWVG GEVLNALAYD VPIPGYKTKN AISLRLWDAK ASAEDFNLFQ FNDGQYESAA QLHARAQQIC AVLYPGDATE EGKLLRLKQQ
301: YFLCSASLQD IFFRFKERKA DRVSGKWSEF PAKVAVQLND THPTLAIPEL MRLLMDVEGL GWDEAWDITN KTIAYTNHTV LPEALEKWSQ IVMRKLLPRH
401: MEIIEEIDKR FKEMVISTRK EMEGKIDSMR ILDNSNPQKP VVRMANLCVV SAHTVNGVAE LHSNILKEEL FADYLSIWPN KFQNKTNGIT PRRWLRFCNP
501: ELSEIVTKWL KTDQWTSNLD LLTGLRKFAD DEKLHAEWAS AKLASKKRLA KHVLDVTGVT IDPNSLFDIQ IKRIHEYKRQ LLNILGAVYR YKKLKGMSAE
601: ERQKVTPRTV MIGGKAFATY TNAKRIVKLV NDVGAVVNND PDVNKYLKVV FIPNYNVSVA EVLIPGSELS QHISTAGMEA SGTSNMKFSL NGCVIIGTLD
701: GANVEIREEV GQENFFLFGA KADQVAGLRK DRENGLFKPD PRFEEAKQLI RSGAFGTYDY APLLDSLEGN SGFGRGDYFL VGYDFPSYID AQAQVDEAYK
801: DKKKWIKMSI LNTAGSGKFS SDRTIAQYAK EIWGITASPV S

Best Arabidopsis Sequence Match ( AT3G46970.1 )
(BLAST)

001: MANANGKAAT SLPEKISAKA NPEADDATEI AGNIVYHAKY SPHFSPLKFG PEQALYATAE SLRDRLIQLW NETYVHFNKV DPKQTYYLSM EYLQGRALTN
101: AIGNLNLQGP YADALRTLGY ELEEIAEQEK DAALGNGGLG RLASCFLDSM ATLNLPAWGY GLRYRHGLFK QIITKKGQEE IPEDWLEKFS PWEIVRHDVV
201: FPVRFFGKVQ VNPDGSRKWV DGDVVQALAY DVPIPGYGTK NTISLRLWEA KARAEDLDLF QFNEGEYELA AQLHSRAQQI CTVLYPGDAT ENGKLLRLKQ
301: QFFLCSASLQ DIISRFHERS TTEGSRKWSE FPSKVAVQMN DTHPTLAIPE LMRLLMDDNG LGWDEAWDVT SKTVAYTNHT VLPEALEKWS QSLMWKLLPR
401: HMEIIEEIDK RFVQTIRDTR VDLEDKISSL SILDNNPQKP VVRMANLCVV SSHTVNGVAQ LHSDILKAEL FADYVSIWPN KFQNKTNGIT PRRWLRFCSP
501: ELSDIITKWL KTDKWITDLD LLTGLRQFAD NEELQSEWAS AKTANKKRLA QYIERVTGVS IDPTSLFDIQ VKRIHEYKRQ LMNILGVVYR FKKLKEMKPE
601: ERKKTVPRTV MIGGKAFATY TNAKRIVKLV NDVGDVVNSD PEVNEYLKVV FVPNYNVTVA EMLIPGSELS QHISTAGMEA SGTSNMKFAL NGCLIIGTLD
701: GANVEIREEV GEENFFLFGA TADQVPRLRK EREDGLFKPD PRFEEAKQFV KSGVFGSYDY GPLLDSLEGN TGFGRGDYFL VGYDFPSYMD AQAKVDEAYK
801: DRKGWLKMSI LSTAGSGKFS SDRTIAQYAK EIWNIEACPV P

Arabidopsis Description

PHS2Alpha-glucan phosphorylase 2, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9SD76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.