Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G447500.1 | Wheat | nucleus | 44.58 | 92.5 |
| TraesCS6A01G403600.1 | Wheat | nucleus | 44.58 | 92.5 |
| TraesCS6D01G387100.1 | Wheat | nucleus | 43.37 | 90.0 |
| Os02t0824400-01 | Rice | nucleus | 39.16 | 82.28 |
| Zm00001d051860_P001 | Maize | nucleus | 37.95 | 78.75 |
| EES07787 | Sorghum | nucleus | 37.95 | 78.75 |
| GSMUA_Achr4P11990_001 | Banana | nucleus | 36.14 | 73.17 |
| KRH48163 | Soybean | nucleus | 34.34 | 70.37 |
| KRH65065 | Soybean | nucleus | 33.73 | 69.14 |
| CDY27353 | Canola | nucleus | 31.93 | 67.09 |
| CDY18894 | Canola | nucleus | 31.93 | 67.09 |
| PGSC0003DMT400000471 | Potato | nucleus | 31.93 | 66.25 |
| CDY37071 | Canola | nucleus | 31.33 | 65.82 |
| AT2G45860.1 | Thale cress | nucleus | 31.33 | 65.82 |
| CDX74770 | Canola | nucleus | 31.33 | 65.82 |
| Bra004943.1-P | Field mustard | nucleus | 31.33 | 65.82 |
| Bra039308.1-P | Field mustard | nucleus | 30.72 | 64.56 |
| Solyc01g094470.2.1 | Tomato | nucleus | 31.33 | 64.2 |
| VIT_15s0046g02920.t01 | Wine grape | nucleus | 30.12 | 61.73 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G017740.1 | EnsemblPlantsGene:HORVU0Hr1G017740 | ncoils:Coil | PANTHER:PTHR36745 | SEG:seg | UniParc:UPI000B466794 |
| UniProt:A0A287E4P4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:93074648..93077112
Molecular Weight (calculated)
18021.8 Da
IEP (calculated)
9.804
GRAVY (calculated)
-0.463
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: LIAGRWGEEE EEEEKTFLGS ARVCLCLCLP AAGGEATPTM SKKNSLSKRK KQHEFDLQST ATTHPLSLSL SSFVDDGFAA VERHGPIWFG FELIARGVCV
101: CVCVCPGEKK AKDEQAKKLQ AKKSKMKIDG SDKKKGSSFK VGKKKVKTKL SALSKAKAAQ AMEVDN
101: CVCVCPGEKK AKDEQAKKLQ AKKSKMKIDG SDKKKGSSFK VGKKKVKTKL SALSKAKAAQ AMEVDN
1: MSKKNNLAKR KKQHEYNLQK EKELQDKKIK KLHANKNKMK VDGSGKKKKG GFSVGKKKLK TKLTPTAKAK AAQAMELDN
Arabidopsis Description
At2g45860 [Source:UniProtKB/TrEMBL;Acc:O80833]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.