Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G447500.1 | Wheat | nucleus | 100.0 | 100.0 |
| TraesCS6D01G387100.1 | Wheat | nucleus | 96.25 | 96.25 |
| Os02t0824400-01 | Rice | nucleus | 82.5 | 83.54 |
| Zm00001d051860_P001 | Maize | nucleus | 81.25 | 81.25 |
| EES07787 | Sorghum | nucleus | 81.25 | 81.25 |
| GSMUA_Achr4P11990_001 | Banana | nucleus | 78.75 | 76.83 |
| KRH48163 | Soybean | nucleus | 75.0 | 74.07 |
| KRH65065 | Soybean | nucleus | 73.75 | 72.84 |
| PGSC0003DMT400000471 | Potato | nucleus | 68.75 | 68.75 |
| CDY18894 | Canola | nucleus | 66.25 | 67.09 |
| CDY27353 | Canola | nucleus | 66.25 | 67.09 |
| Solyc01g094470.2.1 | Tomato | nucleus | 67.5 | 66.67 |
| Bra004943.1-P | Field mustard | nucleus | 65.0 | 65.82 |
| CDY37071 | Canola | nucleus | 65.0 | 65.82 |
| CDX74770 | Canola | nucleus | 65.0 | 65.82 |
| AT2G45860.1 | Thale cress | nucleus | 65.0 | 65.82 |
| Bra039308.1-P | Field mustard | nucleus | 63.75 | 64.56 |
| VIT_15s0046g02920.t01 | Wine grape | nucleus | 65.0 | 64.2 |
| HORVU0Hr1G017740.1 | Barley | cytosol, endoplasmic reticulum | 92.5 | 44.58 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G403600.1 | EnsemblPlantsGene:TraesCS6A01G403600 | ncoils:Coil | PANTHER:PTHR36745 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr6A:+:610897917..610899577
Molecular Weight (calculated)
9048.2 Da
IEP (calculated)
11.146
GRAVY (calculated)
-1.461
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MSKKNSLSKR KKQHEFDLQR EKKAKEEQAK KLQAKKSKMK IDGSDKKKKG SSFKVGKKKV KTKLSALGKA KAAQAMELDN
1: MSKKNNLAKR KKQHEYNLQK EKELQDKKIK KLHANKNKMK VDGSGKKKKG GFSVGKKKLK TKLTPTAKAK AAQAMELDN
Arabidopsis Description
At2g45860 [Source:UniProtKB/TrEMBL;Acc:O80833]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.