Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051860_P001 | Maize | nucleus | 87.34 | 86.25 |
| EES07787 | Sorghum | nucleus | 87.34 | 86.25 |
| TraesCS6B01G447500.1 | Wheat | nucleus | 83.54 | 82.5 |
| TraesCS6A01G403600.1 | Wheat | nucleus | 83.54 | 82.5 |
| GSMUA_Achr4P11990_001 | Banana | nucleus | 84.81 | 81.71 |
| TraesCS6D01G387100.1 | Wheat | nucleus | 82.28 | 81.25 |
| KRH48163 | Soybean | nucleus | 73.42 | 71.6 |
| KRH65065 | Soybean | nucleus | 73.42 | 71.6 |
| PGSC0003DMT400000471 | Potato | nucleus | 72.15 | 71.25 |
| CDY18894 | Canola | nucleus | 69.62 | 69.62 |
| CDY27353 | Canola | nucleus | 69.62 | 69.62 |
| Bra004943.1-P | Field mustard | nucleus | 68.35 | 68.35 |
| CDY37071 | Canola | nucleus | 68.35 | 68.35 |
| CDX74770 | Canola | nucleus | 68.35 | 68.35 |
| AT2G45860.1 | Thale cress | nucleus | 68.35 | 68.35 |
| Solyc01g094470.2.1 | Tomato | nucleus | 69.62 | 67.9 |
| VIT_15s0046g02920.t01 | Wine grape | nucleus | 69.62 | 67.9 |
| Bra039308.1-P | Field mustard | nucleus | 67.09 | 67.09 |
| HORVU0Hr1G017740.1 | Barley | cytosol, endoplasmic reticulum | 82.28 | 39.16 |
Protein Annotations
| EMBL:AK121390 | EnsemblPlants:Os02t0824400-01 | EnsemblPlantsGene:Os02g0824400 | EntrezGene:4331205 | ncoils:Coil | PANTHER:PTHR36745 |
| ProteinID:BAD22864.1 | ProteinID:BAD22932.1 | ProteinID:BAF10489.1 | ProteinID:BAS81670.1 | ProteinID:EEE58076.1 | RefSeq:XP_015623617.1 |
| SEG:seg | UniParc:UPI00003B0476 | UniProt:Q6K9W4 | MapMan:35.2 | : | : |
Description
Conserved hypothetical protein. (Os02t0824400-01)
Coordinates
chr2:-:35421604..35423687
Molecular Weight (calculated)
9011.3 Da
IEP (calculated)
11.221
GRAVY (calculated)
-1.322
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MSKKNNLAKR KKQHEFDLQR EKEAKEKLAK KLQAKKSKMK IDGDVKRKGG KFKVGKKKVK TKLSALTKAK AAQAMEVDK
1: MSKKNNLAKR KKQHEYNLQK EKELQDKKIK KLHANKNKMK VDGSGKKKKG GFSVGKKKLK TKLTPTAKAK AAQAMELDN
Arabidopsis Description
At2g45860 [Source:UniProtKB/TrEMBL;Acc:O80833]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.