Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G035430.1 | Barley | cytosol, nucleus | 54.05 | 92.31 |
| HORVU3Hr1G021640.1 | Barley | cytosol, nucleus | 61.26 | 80.0 |
| HORVU5Hr1G040910.1 | Barley | cytosol, nucleus | 61.26 | 80.0 |
| HORVU4Hr1G012300.2 | Barley | cytosol, nucleus, plastid | 63.96 | 75.53 |
| HORVU5Hr1G048580.1 | Barley | cytosol, mitochondrion | 67.57 | 69.44 |
| HORVU1Hr1G036940.2 | Barley | cytosol | 29.73 | 63.46 |
| HORVU7Hr1G026830.2 | Barley | mitochondrion | 63.96 | 46.71 |
| HORVU4Hr1G090110.2 | Barley | plastid | 54.95 | 29.05 |
| HORVU5Hr1G122170.4 | Barley | plastid | 49.55 | 26.19 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 54.95 | 22.59 |
| HORVU6Hr1G018230.1 | Barley | plastid | 8.11 | 7.38 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G024200.2 | EnsemblPlantsGene:HORVU0Hr1G024200 | Gene3D:2.20.70.30 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | PFAM:PF01849 | PFscan:PS51151 |
| SEG:seg | SMART:SM01407 | UniParc:UPI000B463564 | UniProt:A0A287E8Q8 | MapMan:19.1.2.1.2 | : |
Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A287E8Q8]
Coordinates
chrchrUn:+:124711007..124724153
Molecular Weight (calculated)
12526.3 Da
IEP (calculated)
8.511
GRAVY (calculated)
-0.115
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: APVFCCHKLK GLHVVCGSRC KKKKAVHKTA TTDDKRLQSM LKRVGVNTIP AIEEVNIFKD DLVIQFLNPK GEFCLLFVDN LDAPTHESFQ TNFPLLLDAS
101: ELNQVLRTWS T
101: ELNQVLRTWS T
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
Arabidopsis Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.