Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G332100.1 | Wheat | golgi, unclear | 68.1 | 91.08 |
| EER93092 | Sorghum | cytosol, mitochondrion, nucleus, peroxisome | 64.29 | 85.44 |
| Os03t0851000-01 | Rice | cytosol, mitochondrion, nucleus, peroxisome | 63.81 | 84.81 |
| Zm00001d034855_P001 | Maize | extracellular | 62.86 | 83.54 |
| HORVU2Hr1G035430.1 | Barley | cytosol, nucleus | 20.48 | 66.15 |
| HORVU1Hr1G036940.2 | Barley | cytosol | 15.71 | 63.46 |
| HORVU3Hr1G021640.1 | Barley | cytosol, nucleus | 24.29 | 60.0 |
| HORVU5Hr1G040910.1 | Barley | cytosol, nucleus | 24.29 | 60.0 |
| HORVU4Hr1G012300.2 | Barley | cytosol, nucleus, plastid | 25.71 | 57.45 |
| HORVU4Hr1G090110.2 | Barley | plastid | 55.71 | 55.71 |
| HORVU7Hr1G026830.2 | Barley | mitochondrion | 36.67 | 50.66 |
| HORVU0Hr1G024200.2 | Barley | cytosol, mitochondrion | 26.19 | 49.55 |
| HORVU6Hr1G018230.1 | Barley | plastid | 27.62 | 47.54 |
| HORVU5Hr1G048580.1 | Barley | cytosol, mitochondrion | 24.29 | 47.22 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 56.19 | 43.7 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G122170.4 | EnsemblPlantsGene:HORVU5Hr1G122170 | Gene3D:2.20.70.30 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | PFAM:PF01849 | PFscan:PS51151 |
| SEG:seg | SMART:SM01407 | UniParc:UPI000B476D53 | UniProt:A0A287SZP7 | MapMan:19.1.2.1.2 | : |
Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A287SZP7]
Coordinates
chrchr5H:-:661443387..661445705
Molecular Weight (calculated)
22931.6 Da
IEP (calculated)
10.938
GRAVY (calculated)
-0.879
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: TTSGANVQRT KQPGARAQKR KPYNPPSKPT RLPCAAAPAA HPPHPRRSLK PHRPPAPTPP PTRSGKMNKE RLMKMAGAVR TGGKGTVRRK KKAVHKTATT
101: DDKRLQSTLK RVGVNTIPAI EEVNIFKDDL VIQFLNPKVQ ASIAANTWVV SGTPQTKSPD NMEHLKRIAE EMQKQVAAAG AIQPKEENDD DVPELVPGET
201: FEEVAQETKA
101: DDKRLQSTLK RVGVNTIPAI EEVNIFKDDL VIQFLNPKVQ ASIAANTWVV SGTPQTKSPD NMEHLKRIAE EMQKQVAAAG AIQPKEENDD DVPELVPGET
201: FEEVAQETKA
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKRLQ STLKRIGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGSPQT KKLQDILPQI
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
Arabidopsis Description
BTF3Basic transcription factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMW7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.