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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear

Predictor Summary:
  • peroxisome 1
  • mitochondrion 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, unclear
Any Predictor:mitochondrion, nucleus, peroxisome
MultiLoc:peroxisome
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
 golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93092 Sorghum cytosol, mitochondrion, nucleus, peroxisome 94.27 93.67
Os03t0851000-01 Rice cytosol, mitochondrion, nucleus, peroxisome 93.63 93.04
Zm00001d034855_P001 Maize extracellular 92.36 91.77
TraesCS1A01G159300.1 Wheat cytosol, nucleus, plastid 79.62 71.43
TraesCS5A01G550800.1 Wheat cytosol 78.34 69.49
HORVU5Hr1G122170.4 Barley plastid 91.08 68.1
HORVU6Hr1G018230.1 Barley plastid 43.95 56.56
Protein Annotations
EnsemblPlants:TraesCS4A01G332100.1EnsemblPlantsGene:TraesCS4A01G332100Gene3D:2.20.70.30InterPro:IPR002715InterPro:IPR038187InterPro:NAC_A/B_dom_sf
InterPro:Nas_poly-pep-assoc_cplx_domPANTHER:PTHR10351PANTHER:PTHR10351:SF47PFAM:PF01849PFscan:PS51151SEG:seg
SMART:SM01407MapMan:19.1.2.1.2::::
Description
No Description!
Coordinates
chr4A:-:616507393..616508992
Molecular Weight (calculated)
17312.9 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.552
Length
157 amino acids
Sequence
(BLAST)
001: MNKERLMKMA GAVRTGGKGT VRRKKKAVHK TATTDDKRLQ STLKRVGVNT IPAIEEVNIF KDDLVIQFLN PKVQASIAAN TWVVSGTPQT KKLQDVLPSI
101: INQLGPDNME HLKRIAEEMQ KQVAAAGAIQ PKEENDDDVP ELVPGETFEE VAQETKA
Best Arabidopsis Sequence Match ( AT1G17880.1 )
(BLAST)
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKRLQ STLKRIGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGSPQT KKLQDILPQI
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
Arabidopsis Description
BTF3Basic transcription factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMW7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.