Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- peroxisome 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G332100.1 | Wheat | golgi, unclear | 56.56 | 43.95 |
| EER93092 | Sorghum | cytosol, mitochondrion, nucleus, peroxisome | 50.82 | 39.24 |
| Os03t0851000-01 | Rice | cytosol, mitochondrion, nucleus, peroxisome | 50.82 | 39.24 |
| Zm00001d034855_P001 | Maize | extracellular | 50.0 | 38.61 |
| HORVU5Hr1G122170.4 | Barley | plastid | 47.54 | 27.62 |
| HORVU4Hr1G090110.2 | Barley | plastid | 40.16 | 23.33 |
| HORVU7Hr1G026830.2 | Barley | mitochondrion | 25.41 | 20.39 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 40.16 | 18.15 |
| HORVU4Hr1G012300.2 | Barley | cytosol, nucleus, plastid | 9.84 | 12.77 |
| HORVU1Hr1G036940.2 | Barley | cytosol | 4.1 | 9.62 |
| HORVU5Hr1G048580.1 | Barley | cytosol, mitochondrion | 7.38 | 8.33 |
| HORVU0Hr1G024200.2 | Barley | cytosol, mitochondrion | 7.38 | 8.11 |
| HORVU2Hr1G035430.1 | Barley | cytosol, nucleus | 4.1 | 7.69 |
| HORVU3Hr1G021640.1 | Barley | cytosol, nucleus | 4.92 | 7.06 |
| HORVU5Hr1G040910.1 | Barley | cytosol, nucleus | 4.92 | 7.06 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G018230.1 | EnsemblPlantsGene:HORVU6Hr1G018230 | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | SEG:seg | UniParc:UPI000B481877 |
| UniProt:A0A287TGU8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:45430459..45432005
Molecular Weight (calculated)
13320.6 Da
IEP (calculated)
9.527
GRAVY (calculated)
-0.909
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSCCRARSR GWASTPSRSS RRSTSSRTTS SSSSSTPKCK GPSPQTHGWS VGLPRPRLQD VLPSIINQLG PDNMEHLKRI AKEMRKQVAA TGAIQPKEEN
101: DDDVPELVPG ETFEEVAQET KA
101: DDDVPELVPG ETFEEVAQET KA
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKRLQ STLKRIGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGSPQT KKLQDILPQI
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
Arabidopsis Description
BTF3Basic transcription factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMW7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.