Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93092 | Sorghum | cytosol, mitochondrion, nucleus, peroxisome | 94.94 | 94.94 |
| TraesCS4A01G332100.1 | Wheat | golgi, unclear | 93.04 | 93.63 |
| Zm00001d034855_P001 | Maize | extracellular | 92.41 | 92.41 |
| Os03t0109600-01 | Rice | plasma membrane | 75.32 | 68.0 |
| HORVU5Hr1G122170.4 | Barley | plastid | 84.81 | 63.81 |
| HORVU6Hr1G018230.1 | Barley | plastid | 39.24 | 50.82 |
Protein Annotations
| MapMan:19.1.2.1.2 | Gene3D:2.20.70.30 | EntrezGene:4334799 | ProteinID:AAO20058.1 | ProteinID:ABF99924.1 | EMBL:AK060496 |
| EMBL:AK102202 | EMBL:AK104157 | ProteinID:BAF13825.1 | ProteinID:BAS87380.1 | ncoils:Coil | ProteinID:EEE60309.1 |
| GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EMBL:GU120352 | InterPro:IPR002715 |
| InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | EnsemblPlantsGene:Os03g0851000 | EnsemblPlants:Os03t0851000-01 | PFAM:PF01849 |
| PFscan:PS51151 | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | UniProt:Q851Y9 | SMART:SM01407 | UniParc:UPI0000002790 |
| RefSeq:XP_015630445.1 | SEG:seg | : | : | : | : |
Description
Transcription factor BTF3bSimilar to Transcription factor homolog BTF3-like protein. (Os03t0851000-01);Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-02)
Coordinates
chr3:+:35822112..35824355
Molecular Weight (calculated)
17286.8 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.576
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKERLMKMA GAVRTGGKGT VRRKKKAVHK TGTTDDKRLQ STLKRVGVNT IPAIEEVNIF KDDLVIQFVN PKVQASIAAN TWVVSGSPQT KKLQDVLPGI
101: INQLGPDNME HLKRIAEEMQ KQVAAAGATA QAKEENDDDV PELVPGENFE EVAQETKA
101: INQLGPDNME HLKRIAEEMQ KQVAAAGATA QAKEENDDDV PELVPGENFE EVAQETKA
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKRLQ STLKRIGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGSPQT KKLQDILPQI
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
Arabidopsis Description
BTF3Basic transcription factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMW7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.