Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G021640.1 | Barley | cytosol, nucleus | 100.0 | 100.0 |
| HORVU2Hr1G035430.1 | Barley | cytosol, nucleus | 72.94 | 95.38 |
| HORVU4Hr1G012300.2 | Barley | cytosol, nucleus, plastid | 84.71 | 76.6 |
| HORVU5Hr1G048580.1 | Barley | cytosol, mitochondrion | 82.35 | 64.81 |
| HORVU1Hr1G036940.2 | Barley | cytosol | 37.65 | 61.54 |
| HORVU0Hr1G024200.2 | Barley | cytosol, mitochondrion | 80.0 | 61.26 |
| HORVU7Hr1G026830.2 | Barley | mitochondrion | 81.18 | 45.39 |
| HORVU5Hr1G122170.4 | Barley | plastid | 60.0 | 24.29 |
| HORVU4Hr1G090110.2 | Barley | plastid | 58.82 | 23.81 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 61.18 | 19.26 |
| HORVU6Hr1G018230.1 | Barley | plastid | 7.06 | 4.92 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G040910.1 | EnsemblPlantsGene:HORVU5Hr1G040910 | Gene3D:2.20.70.30 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | PFAM:PF01849 | PFscan:PS51151 |
| SMART:SM01407 | UniParc:UPI000B480335 | UniProt:A0A287KDW1 | MapMan:19.1.2.1.2 | : | : |
Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A287KDW1]
Coordinates
chrchr5H:+:306359725..306360865
Molecular Weight (calculated)
9713.9 Da
IEP (calculated)
9.035
GRAVY (calculated)
-0.267
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: CAHVFCCHKL KGLHVVCGSR CRKKKAVHKT ATTDDKRLQS MLKRVGVNTI LAIEEVNIFK DDLVIQFLNP KGENTEQSYA YMVEY
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
Arabidopsis Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.