Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G071920.1 | Barley | golgi | 58.78 | 33.72 |
| HORVU6Hr1G040960.1 | Barley | cytosol | 22.86 | 23.33 |
| HORVU4Hr1G089670.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 35.51 | 18.35 |
| HORVU7Hr1G102070.1 | Barley | golgi | 25.31 | 13.93 |
| HORVU4Hr1G054910.1 | Barley | golgi, mitochondrion | 23.67 | 12.83 |
| HORVU4Hr1G054120.3 | Barley | golgi, plasma membrane | 23.27 | 12.31 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 21.63 | 11.96 |
| HORVU4Hr1G054020.3 | Barley | golgi | 21.22 | 11.95 |
| HORVU0Hr1G025530.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 8.98 | 8.91 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G014590.1 | EnsemblPlantsGene:HORVU1Hr1G014590 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF3 |
| PFAM:PF05637 | SEG:seg | UniParc:UPI000B47EEBB | UniProt:A0A287EPU1 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr1H:-:40474878..40476428
Molecular Weight (calculated)
27560.2 Da
IEP (calculated)
7.181
GRAVY (calculated)
-0.750
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPDSPDYER WGAVLTSTFR DKLFNESDDQ SALVYMLQHK GSPWRGKVFL ENSYYLQGYW VEIVGRLGGI AARYEAMERR APTAALLRRR HTASWEHEGY
101: AQARKAALAG AGLAESGVNG WRRPFVTHFT GCQPCSDDRN RDYSGDSCGD RNRDYSGDSC ERLGEHVELP GGPANSQRRQ EPEHLERLVH EPRADEVGDD
201: DGVGARVGER ALVLKLFDEM RRAMLAPDMW VSLVRKSVKR VKSGS
101: AQARKAALAG AGLAESGVNG WRRPFVTHFT GCQPCSDDRN RDYSGDSCGD RNRDYSGDSC ERLGEHVELP GGPANSQRRQ EPEHLERLVH EPRADEVGDD
201: DGVGARVGER ALVLKLFDEM RRAMLAPDMW VSLVRKSVKR VKSGS
001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW
Arabidopsis Description
GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.