Factsheet for HORVU4Hr1G054910.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

golgi 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G054910.1	golgi, golgi
HORVU5Hr1G042000.1	golgi, golgi
HORVU6Hr1G040960.1	golgi, golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62720.1	HORVU5Hr1G042000.1	AT1G74380.1	22665445
AT3G62720.1	HORVU6Hr1G040960.1	AT1G74380.1	22665445
AT3G62720.1	HORVU4Hr1G054910.1	AT4G02500.1	22665445
AT4G02500.1	HORVU5Hr1G042000.1	AT1G74380.1	22665445
AT4G02500.1	HORVU6Hr1G040960.1	AT1G74380.1	22665445
AT4G02500.1	HORVU4Hr1G054910.1	AT4G02500.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G188100.1	Wheat	golgi, mitochondrion	97.12	97.34
TraesCS4A01G116100.2	Wheat	golgi, mitochondrion	97.12	97.12
TraesCS4D01G189500.1	Wheat	golgi, mitochondrion	96.9	97.12
TraesCS1B01G115300.1	Wheat	golgi, mitochondrion	96.9	93.79
Os03t0300000-01	Rice	cytosol	70.35	91.38
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	53.1	90.57
EER92398	Sorghum	golgi	86.95	88.12
Zm00001d025851_P001	Maize	cytosol	70.35	87.85
Zm00001d047694_P001	Maize	golgi	86.95	87.72
Zm00001d028811_P001	Maize	plasma membrane	86.73	87.7
Zm00001d051264_P001	Maize	mitochondrion, plastid	75.44	85.89
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	34.51	80.83
GSMUA_Achr1P24760_001	Banana	mitochondrion	73.45	76.85
GSMUA_Achr8P22410_001	Banana	golgi, mitochondrion	71.02	74.83
CDY22055	Canola	mitochondrion	72.79	73.27
CDX90935	Canola	mitochondrion	72.57	73.05
CDY11443	Canola	cytosol	9.51	72.88
VIT_07s0005g00150.t01	Wine grape	mitochondrion	72.35	72.35
CDY18017	Canola	mitochondrion	53.54	72.24
Bra036262.1-P	Field mustard	mitochondrion	73.45	71.86
Bra000877.1-P	Field mustard	mitochondrion	73.23	71.49
AT4G02500.1	Thale cress	mitochondrion	72.79	71.37
KRH37112	Soybean	golgi, mitochondrion	71.02	71.33
Bra018545.1-P	Field mustard	mitochondrion	72.79	71.21
KRG96428	Soybean	mitochondrion	71.46	70.99
CDY50378	Canola	cytosol	72.79	70.15
Bra007696.1-P	Field mustard	mitochondrion	69.47	68.86
VIT_05s0020g01530.t01	Wine grape	mitochondrion	70.8	68.67
PGSC0003DMT400058812	Potato	mitochondrion	70.35	68.53
AT3G62720.1	Thale cress	mitochondrion	69.47	68.26
CDY70090	Canola	mitochondrion	53.1	67.8
CDX93965	Canola	mitochondrion	68.36	67.47
Bra014396.1-P	Field mustard	mitochondrion	68.36	67.32
CDX76657	Canola	mitochondrion	28.54	67.19
CDY70418	Canola	golgi, mitochondrion	68.36	67.17
CDX97271	Canola	mitochondrion	39.38	66.17
HORVU6Hr1G040960.1	Barley	cytosol	34.07	64.17
KRH12052	Soybean	mitochondrion	36.95	62.55
CDY65940	Canola	mitochondrion	36.73	62.41
KRH68171	Soybean	golgi, mitochondrion	30.97	58.09
CDY11442	Canola	cytosol, extracellular, mitochondrion, plastid	10.4	55.29
Solyc01g067930.2.1	Tomato	mitochondrion	24.11	51.9
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	48.67	49.66
CDY11441	Canola	mitochondrion	20.58	49.21
HORVU4Hr1G054020.3	Barley	golgi	46.24	48.05
HORVU7Hr1G102070.1	Barley	golgi	44.69	45.39
HORVU4Hr1G054120.3	Barley	golgi, plasma membrane	45.8	44.71
HORVU6Hr1G071920.1	Barley	golgi	36.5	38.64
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	34.07	32.49
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	17.7	32.39
HORVU1Hr1G014590.1	Barley	nucleus	12.83	23.67

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	EMBL:AK375582	UniProt:F2EHF5	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016049	GO:GO:0016740	GO:GO:0016757	GO:GO:0030154	GO:GO:0040007
GO:GO:0048767	InterPro:Glyco_trans_34	EnsemblPlantsGene:HORVU4Hr1G054910	EnsemblPlants:HORVU4Hr1G054910.1	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF6	TMHMM:TMhelix	UniParc:UPI0002008CAF	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EHF5]

Coordinates

chrchr4H:+:460072407..460075545

Molecular Weight (calculated)

52387.8 Da

IEP (calculated)

7.639

GRAVY (calculated)

-0.502

Length

452 amino acids

Sequence
(BLAST)

001: MWVAERVLGE RRMREIQRFT RNAKLTVVCL MLTILVLRGT LGAGKFGTPQ QDLIELRHRF ISHPQRALAE HHDARSKASD AADAASDARS KAAARDDEPE
101: PQPRSLRDPP YTLGPKISDW DEQRAAWNRR HPETPPFLND VKPRVMLVTG SSPKPCENPV GDHYLLKSIK NKIDYCRIHG LEIFYNMALL DAELAGFWAK
201: LPLLRALLLA HPEVEFFWWM DSDAMFTDMA FELPWERYGP YNFILHGWDE MVYDDKNWIG LNTGSFLLRN CQWSLDYLDT WAPMGPKGPV RIEAGKVLTK
301: YLKDRPVFEA DDQSAMVYIL ATQREKWGNK VYLENGYYLH GYWGILVDRY EEMLENYQPG LGDHRWPLVT HFVGCKPCSK FGDYPVERCL KQMDRAFNFG
401: DNQVLHMYGF EHKSLASRRI KRIRNETSNP LDMKDDYGLL HPAFKAVKTA TT

Best Arabidopsis Sequence Match ( AT3G62720.1 )
(BLAST)

001: MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT

Arabidopsis Description

XXT1XXT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VEJ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.