Factsheet for HORVU4Hr1G054020.3

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi
MultiLoc:	golgi
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G120300.1	Wheat	golgi	94.48	94.92
TraesCS4D01G185800.1	Wheat	mitochondrion	94.25	88.94
Os03t0306100-00	Rice	golgi	78.62	76.17
Zm00001d039763_P001	Maize	golgi, mitochondrion	74.94	72.61
EES00270	Sorghum	golgi, mitochondrion	74.94	71.96
HORVU4Hr1G054120.3	Barley	golgi, plasma membrane	62.99	59.18
HORVU7Hr1G102070.1	Barley	golgi	59.31	57.98
HORVU6Hr1G040960.1	Barley	cytosol	30.8	55.83
HORVU4Hr1G054910.1	Barley	golgi, mitochondrion	48.05	46.24
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	42.3	41.53
HORVU6Hr1G071920.1	Barley	golgi	34.71	35.36
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	19.77	34.82
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	34.48	31.65
HORVU1Hr1G014590.1	Barley	nucleus	11.95	21.22

Protein Annotations

EnsemblPlants:HORVU4Hr1G054020.3	EnsemblPlantsGene:HORVU4Hr1G054020	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF9	PFAM:PF05637	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B467BF4	UniProt:A0A287P3K4	MapMan:21.2.1.1.2	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:449910612..449911931

Molecular Weight (calculated)

49013.6 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.268

Length

435 amino acids

Sequence
(BLAST)

001: MAEQHDGKPA NDLRWRPHYG CPARGSTTIP LVFLLLLTGA LFLILGPSNS VLTLPSLRVV FSNPIHIATA APPPPAPAPA AANASDEDIG LPPPRQLTDP
101: PYSLGRTILD YDARRSAWLA AHPEFPARVP PTGRPRVLMV TGSAPSRCPD PDGDHLLLRA FKNKADYCRV HGLEVYYNTA FLDAEMTGFW AKLPLLRSLM
201: LAHPEVELLW WVDSDAVFTD MRFELPWERY AAHNLVLHGW EAKVYEEKNW VGVNTGSILI RNCQWSLDLL HAMAPMGPRG PVRDMYGELF ARELSGRPPF
301: EADDQSALIY LLVTQRERWG DKVFFENSYE LNGFWELIVD RYEELQRKGA WPLVTHFVGC KPCRRYADSY PVDRCRLGME RAFNFADDQI LKLYGFGHES
401: LNGTAVQRVR NETGGPLDAE DEALGRLLHP TFRGT

Best Arabidopsis Sequence Match ( AT1G74380.1 )
(BLAST)

001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

Arabidopsis Description

XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.