Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G054020.3 | Barley | golgi | 94.92 | 94.48 |
| TraesCS4D01G185800.1 | Wheat | mitochondrion | 97.23 | 91.32 |
| Os03t0306100-00 | Rice | golgi | 79.21 | 76.39 |
| Zm00001d039763_P001 | Maize | golgi, mitochondrion | 76.44 | 73.72 |
| EES00270 | Sorghum | golgi, mitochondrion | 76.67 | 73.29 |
| TraesCS4A01G120100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 63.51 | 62.5 |
| TraesCS7A01G452400.1 | Wheat | golgi | 61.43 | 61.15 |
| TraesCS4A01G116100.2 | Wheat | golgi, mitochondrion | 47.81 | 45.8 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 42.49 | 41.35 |
| TraesCS6A01G196600.1 | Wheat | plastid | 44.57 | 40.38 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G120300.1 | EnsemblPlantsGene:TraesCS4A01G120300 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | InterPro:IPR029044 |
| InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF9 | PFAM:PF05637 | SEG:seg | TMHMM:TMhelix |
| MapMan:21.2.1.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:148126342..148127643
Molecular Weight (calculated)
48683.1 Da
IEP (calculated)
5.912
GRAVY (calculated)
-0.227
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQHDGKPA NGVRWRPHYG CPAAGSTTIP LVFLLLLTGA LLLILGPTDS ILTLPSLRVV FSNPIHIATA APPAVPPAAA NVSDEDIGLP PPRQLTDPPY
101: SLGRTILDYD ARRSAWLAAH PEFPARVPPA GRPRVLVVTG SAPARCPDPD GDHLLLRAFK NKADYCRVHG LEVYYNTAFL DAEMTGFWAK LPLLRSLMMA
201: HPEVELLWWV DSDAVFTDMR FELPWERYAA HNLVLHGWEA KVYEEKSWVG VNTGSILIRN CQWSLDLLHA MAPMGPRGPV RDSYGELFAR ELSGRPPFEA
301: DDQSALIYLL VTQRERWGDK VFFENSYELN GFWELIVDRY EELRREGAWP LVTHFVGCKP CRRYADSYPA DRCRLGMERA FNFADDQILR LYGFGHESLN
401: GTAVQRVRNE TGGPLDAEDE ELGRLLHPTF RAT
101: SLGRTILDYD ARRSAWLAAH PEFPARVPPA GRPRVLVVTG SAPARCPDPD GDHLLLRAFK NKADYCRVHG LEVYYNTAFL DAEMTGFWAK LPLLRSLMMA
201: HPEVELLWWV DSDAVFTDMR FELPWERYAA HNLVLHGWEA KVYEEKSWVG VNTGSILIRN CQWSLDLLHA MAPMGPRGPV RDSYGELFAR ELSGRPPFEA
301: DDQSALIYLL VTQRERWGDK VFFENSYELN GFWELIVDRY EELRREGAWP LVTHFVGCKP CRRYADSYPA DRCRLGMERA FNFADDQILR LYGFGHESLN
401: GTAVQRVRNE TGGPLDAEDE ELGRLLHPTF RAT
001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
Arabidopsis Description
XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.