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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:golgi, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS5A01G129800.1 golgi
TraesCS5B01G128600.1 golgi
TraesCS5D01G137300.1 golgi
TraesCS6A01G196600.1 golgi
TraesCS6B01G221000.1 golgi
TraesCS6D01G181200.1 golgi

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G74380.1 TraesCS5A01G129800.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS5B01G128600.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS5D01G137300.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS6A01G196600.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS6B01G221000.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS6D01G181200.1 AT1G74380.1 22665445
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G181200.1 Wheat plastid 99.37 99.37
TraesCS6B01G221000.1 Wheat plastid 99.16 99.16
HORVU6Hr1G040960.1 Barley cytosol 49.16 97.92
Os02t0529600-01 Rice golgi, peroxisome, plastid 87.87 87.5
Zm00001d016687_P001 Maize plasma membrane 86.82 86.82
EES06903 Sorghum plastid 86.82 86.46
CDX68187 Canola cytosol 36.19 77.58
CDX85826 Canola cytosol 36.19 77.58
CDX73082 Canola cytosol 35.98 77.48
CDX96540 Canola cytosol 35.98 77.48
Bra008146.1-P Field mustard cytosol 35.36 75.78
CDY49114 Canola peroxisome 22.18 75.71
PGSC0003DMT400073000 Potato cytosol 36.19 71.78
GSMUA_Achr10P... Banana cytosol 64.85 71.43
KRH56886 Soybean endoplasmic reticulum 64.44 68.9
KRH03516 Soybean mitochondrion 64.23 68.68
PGSC0003DMT400041333 Potato plastid 64.44 67.84
TraesCS5A01G129800.1 Wheat mitochondrion 62.97 67.64
VIT_17s0000g06590.t01 Wine grape cytosol, golgi, plasma membrane, plastid 63.39 67.33
Bra015915.1-P Field mustard plastid 64.23 67.32
AT5G07720.1 Thale cress cytosol, plastid 64.23 67.18
PGSC0003DMT400063414 Potato plastid 63.18 67.11
AT1G74380.1 Thale cress plastid 64.02 66.96
GSMUA_Achr3P22760_001 Banana cytosol 64.23 66.88
CDX99024 Canola cytosol, golgi, peroxisome, plastid 63.39 66.74
Bra003804.1-P Field mustard plastid 63.81 66.74
Solyc03g115740.1.1 Tomato plastid 62.55 66.44
Bra009305.1-P Field mustard cytosol 62.76 65.93
CDX69995 Canola cytosol 62.76 65.93
CDY19235 Canola cytosol, golgi, plasma membrane, plastid 59.83 63.27
GSMUA_Achr10P... Banana plastid 65.27 61.9
GSMUA_Achr11P... Banana cytosol 65.27 61.42
Solyc05g013020.1.1 Tomato golgi, mitochondrion, plastid 56.28 60.18
CDY26738 Canola golgi, mitochondrion, plasma membrane, plastid 60.67 60.17
Bra025677.1-P Field mustard golgi, mitochondrion, plasma membrane, plastid 60.88 57.85
AT1G18690.4 Thale cress golgi, plastid 61.09 56.92
TraesCS4A01G116100.2 Wheat golgi, mitochondrion 50.21 53.1
TraesCS4A01G120300.1 Wheat golgi 40.38 44.57
TraesCS4A01G120100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 40.17 43.64
TraesCS7A01G452400.1 Wheat golgi 39.54 43.45
Protein Annotations
EnsemblPlants:TraesCS6A01G196600.1EnsemblPlantsGene:TraesCS6A01G196600Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_34InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPANTHER:PTHR31311PANTHER:PTHR31311:SF4PFAM:PF05637SEG:segTMHMM:TMhelix
MapMan:21.2.1.1.2:::::
Description
No Description!
Coordinates
chr6A:-:289025746..289029967
Molecular Weight (calculated)
53137.2 Da
IEP (calculated)
7.119
GRAVY (calculated)
-0.349
Length
478 amino acids
Sequence
(BLAST)
001: MGQEGMGYSS GKAGGGGGGA LPMTAARARG ASPLSTHHRS RKISRTFNNV KITVLCGLVT ILVLRGTIGL NLSLPSQPSD ADALAGAKAV EDIDRILREI
101: RSDSDPSDPT DSDLDSSSVL SNATALNSSE AAAAYAAAVG NHALGPNVSG WDEQRRRWLA QNKGFPATVP GGKPRILLVT GSQPGPCDNP LGDHYLLKST
201: KNKIDYCRFH DIEIVHNLAH LDNELAGYWA KLPLLRRLML SHPEVEWIWW MDSDALFTDM AFELPLSRYD NHNLIIHGYH DLLFEKHSWI ALNTGSFLFR
301: NCQWSLDLLA AWAPMGPKGF IREEAGKILT AYLKGRPAFE ADDQSALIYL LLSQKEKWMD KVYIENSYYL HGFWAGLVDK YEEMMENHHP GLGDERWPFV
401: THFVGCKPCG SYGDYPVDRC LKSMERAFNF ADNQVLRLYG FAHKGLESPK IKRIRSQTTK PINDKEDLDV KAKMSTTS
Best Arabidopsis Sequence Match ( AT5G07720.1 )
(BLAST)
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
Arabidopsis Description
XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.