Factsheet for Bra025677.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	92.64	96.68
Bra008146.1-P	Field mustard	cytosol	38.97	87.89
Bra015915.1-P	Field mustard	plastid	74.35	82.02
Bra003804.1-P	Field mustard	plastid	73.56	80.96
AT1G18690.4	Thale cress	golgi, plastid	79.72	78.17
HORVU6Hr1G040960.1	Barley	cytosol	36.98	77.5
PGSC0003DMT400073000	Potato	cytosol	35.79	74.69
KRH56886	Soybean	endoplasmic reticulum	66.2	74.5
KRH03516	Soybean	mitochondrion	65.81	74.05
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	65.81	73.56
Bra009305.1-P	Field mustard	cytosol	66.4	73.41
PGSC0003DMT400063414	Potato	plastid	64.02	71.56
Solyc03g115740.1.1	Tomato	plastid	63.42	70.89
PGSC0003DMT400041333	Potato	plastid	63.02	69.82
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	57.65	64.88
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	57.06	64.79
TraesCS5A01G129800.1	Wheat	mitochondrion	57.26	64.72
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	57.26	64.72
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	57.06	64.49
GSMUA_Achr10P...	Banana	cytosol	54.87	63.59
TraesCS6D01G181200.1	Wheat	plastid	58.05	61.09
Zm00001d016687_P001	Maize	plasma membrane	58.05	61.09
TraesCS6A01G196600.1	Wheat	plastid	57.85	60.88
TraesCS6B01G221000.1	Wheat	plastid	57.85	60.88
Os02t0529600-01	Rice	golgi, peroxisome, plastid	58.05	60.83
EES06903	Sorghum	plastid	58.05	60.83
GSMUA_Achr3P22760_001	Banana	cytosol	54.87	60.13
Os12t0149300-01	Rice	golgi	55.47	59.87
GSMUA_Achr10P...	Banana	plastid	56.66	56.55
Zm00001d023399_P001	Maize	golgi, mitochondrion	51.09	56.36
EES16639	Sorghum	golgi	52.09	56.34
Zm00001d023417_P001	Maize	golgi, mitochondrion	50.89	56.14
GSMUA_Achr11P...	Banana	cytosol	56.26	55.71
Bra036262.1-P	Field mustard	mitochondrion	46.72	50.87
Bra018545.1-P	Field mustard	mitochondrion	46.72	50.87
Bra007696.1-P	Field mustard	mitochondrion	45.92	50.66
Bra000877.1-P	Field mustard	mitochondrion	46.12	50.11
Bra014396.1-P	Field mustard	mitochondrion	45.13	49.46
EES15672	Sorghum	mitochondrion	43.74	42.72
Zm00001d023398_P001	Maize	mitochondrion	42.74	41.91
Zm00001d043041_P001	Maize	nucleus	23.46	40.0
Bra017847.1-P	Field mustard	golgi	32.21	36.99
Bra039938.1-P	Field mustard	golgi, plastid	31.21	35.04
Zm00001d023418_P001	Maize	nucleus	42.94	20.95

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra025677	EnsemblPlants:Bra025677.1	EnsemblPlants:Bra025677.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0035252
InterPro:Glyco_trans_34	InterPro:IPR029044	UniProt:M4EA70	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311
PANTHER:PTHR31311:SF4	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000253F4BC	SEG:seg	:

Description

AT1G18690 (E=3e-195) | transferase/ transferase, transferring glycosyl groups

Coordinates

chrA06:+:7201710..7203221

Molecular Weight (calculated)

56940.2 Da

IEP (calculated)

5.106

GRAVY (calculated)

-0.413

Length

503 amino acids

Sequence
(BLAST)

001: MVQDALRSSG SGGGLPTTAV SNGGGRGRGL LRGWQVQNTS INIKIMILCG FVTILVLLGT VSFGNLGSSN ADAVNQNLIK ETEPILAESR PASVPTDLEE
101: PPKPEVNPPP DLEEPPKREA NPPPGLEEPK LEANPPTDLE EQLKPEANPP PELEEPPKAE VNPNVTYTLG PRITNWDSQR KVWLSQNPGF PSIVNGKARI
201: LLLTGSSPGP CDKPIGDYYL LKTVKNKIDY CRIHGIEIVY NMAHLDEELS GYWTKLPMIR RLMLSHPEVE WIWWMDSDAL FTDILFEIPM SRYEKHNLVI
301: HGYPDLLFNQ MSWVALNTGV FLLRNCQWSL DLLDAWAPMG PKGPIREEAG KVLTAYLKGR PAFEADDQSA LIYLLLSQKE KWMEKVYVEN QYYLHGFWEG
401: LVDKYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA EERCFKSMER AFNFADNQVL KLYGFSHMGL LSPKVKRIRN ETVSPLEFVD KFDIRRTHEE
501: TKP

Best Arabidopsis Sequence Match ( AT1G18690.1 )
(BLAST)

001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP

Arabidopsis Description

XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.