Factsheet for Bra039938.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

nucleus 1
plastid 3
golgi 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49440	Canola	golgi	99.78	99.78
AT2G22900.1	Thale cress	plastid	88.17	87.97
Bra017847.1-P	Field mustard	golgi	75.89	77.63
PGSC0003DMT400055223	Potato	golgi	60.94	62.05
PGSC0003DMT400023470	Potato	endoplasmic reticulum	36.61	60.74
KRH28334	Soybean	plastid	59.38	58.85
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	58.26	58.13
Solyc03g043920.2.1	Tomato	golgi	53.57	57.97
VIT_00s0322g00030.t01	Wine grape	mitochondrion	43.3	56.56
GSMUA_Achr3P30030_001	Banana	golgi	46.65	52.64
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	51.56	52.03
HORVU6Hr1G071920.1	Barley	golgi	48.21	50.59
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	47.77	50.47
Os02t0723200-01	Rice	mitochondrion	48.88	48.99
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	48.44	48.87
EES07343	Sorghum	golgi	47.99	48.53
TraesCS6D01G266700.1	Wheat	plastid	47.99	46.74
Zm00001d052625_P001	Maize	plastid	45.54	46.26
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	45.31	45.62
EES08636	Sorghum	plastid	45.09	44.99
TraesCSU01G194500.1	Wheat	golgi	45.54	44.54
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	46.21	43.22
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	45.98	43.01
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	45.31	42.83
Zm00001d052628_P001	Maize	plasma membrane	45.76	42.8
TraesCS6B01G078800.1	Wheat	plastid	45.09	42.71
Os11t0546500-00	Rice	golgi, peroxisome, plastid	45.76	42.44
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	44.87	42.41
Zm00001d052627_P001	Maize	plastid	42.63	41.7
OQU83607	Sorghum	plastid	42.63	41.43
Bra008146.1-P	Field mustard	cytosol	18.3	36.77
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	19.64	35.63
Bra009305.1-P	Field mustard	cytosol	35.71	35.16
Bra015915.1-P	Field mustard	plastid	35.04	34.43
Bra003804.1-P	Field mustard	plastid	34.38	33.7
Bra014396.1-P	Field mustard	mitochondrion	33.71	32.9
Bra000877.1-P	Field mustard	mitochondrion	33.48	32.4
Bra036262.1-P	Field mustard	mitochondrion	33.26	32.25
Bra018545.1-P	Field mustard	mitochondrion	33.26	32.25
Bra007696.1-P	Field mustard	mitochondrion	32.59	32.02
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	35.04	31.21

Protein Annotations

MapMan:21.2.3.1.3	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra039938	EnsemblPlants:Bra039938.1	EnsemblPlants:Bra039938.1-P	ncoils:Coil
GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009791	GO:GO:0009987
GO:GO:0010192	GO:GO:0010214	GO:GO:0010392	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0051070	InterPro:Glyco_trans_34	InterPro:IPR029044	UniProt:M4FFR4	InterPro:Nucleotide-diphossugar_trans
PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	TMHMM:TMhelix	UniParc:UPI0002542EE5	SEG:seg

Description

AT2G22900 (E=1e-242) | galactosyl transferase GMA12/MNN10 family protein

Coordinates

chrA09:+:31706824..31708170

Molecular Weight (calculated)

52067.7 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.464

Length

448 amino acids

Sequence
(BLAST)

001: MVSPEASHFQ SSPMAKYTGA RTRPVICFND VVLFLGGAFM SLILVWSFFS FSNSPNLTFS PDKTDASTKC TRGIDMRYDP TDPVFYDDPD LSYTIEKPVK
101: NWDEKRKRWL ELHPSFIPGS ENRTVMITGS QSGPCKNPIG DHLLLRFFKN KVDYCRIHGH DIFYSNALLH PKMKSFWAKL PAVKAAMIAH PEAEWIWWVD
201: SDALFTDMDF TPPFHRYRDH NLVVHGWPGV VYDERSWTAL NAGVFLIRNC QWSMELIDTW TSMGPVSPDF AKWGEIQRSI FKDKLFPESD DQTALIYLLF
301: KHKEVYYPKI YLEGEYYFEG YWLEIVPGLA NITERYLEME REDATLRRRH AEKVSERYAA FREERFLRGE SGGKGSKRRP FVTHFTGCQP CSGDHNTMYN
401: GDTCWNGMIK AINFADNQVM RRYGFVHSDL GKTSPLQPVP FDYPDEPW

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.