Factsheet for VIT_00s0322g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G38310.1	Thale cress	nucleus	18.37	52.5
PGSC0003DMT400055223	Potato	golgi	64.43	50.23
KRH28334	Soybean	plastid	63.85	48.45
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	63.27	48.33
PGSC0003DMT400023470	Potato	endoplasmic reticulum	37.03	47.04
Solyc03g043920.2.1	Tomato	golgi	55.1	45.65
Bra039938.1-P	Field mustard	golgi, plastid	56.56	43.3
CDX76887	Canola	golgi, plastid	56.56	43.3
CDY49440	Canola	golgi	56.56	43.3
AT2G22900.1	Thale cress	plastid	55.1	42.09
Bra017847.1-P	Field mustard	golgi	52.77	41.32
CDY29577	Canola	golgi	52.77	41.32
CDX72649	Canola	golgi	52.19	40.87
AT4G37690.1	Thale cress	golgi	51.02	40.51
GSMUA_Achr3P30030_001	Banana	golgi	45.77	39.55
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	51.02	39.41
HORVU6Hr1G071920.1	Barley	golgi	48.69	39.11
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	48.1	38.92
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	49.56	38.29
EES07343	Sorghum	golgi	48.4	37.47
Os02t0723200-01	Rice	mitochondrion	48.69	37.36
TraesCS6D01G266700.1	Wheat	plastid	47.81	35.65
TraesCSU01G194500.1	Wheat	golgi	46.36	34.72
Zm00001d052625_P001	Maize	plastid	44.02	34.24
EES08636	Sorghum	plastid	44.02	33.63
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	45.77	33.12
TraesCS6B01G078800.1	Wheat	plastid	45.19	32.77
Zm00001d052628_P001	Maize	plasma membrane	45.48	32.57
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	45.48	32.57
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	41.98	32.36
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	44.9	32.15
Os11t0546500-00	Rice	golgi, peroxisome, plastid	44.61	31.68
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	43.73	31.65
Zm00001d052627_P001	Maize	plastid	41.69	31.22
OQU83607	Sorghum	plastid	41.69	31.02
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	36.15	27.56
VIT_07s0005g00150.t01	Wine grape	mitochondrion	34.11	25.89
VIT_05s0020g01530.t01	Wine grape	mitochondrion	32.94	24.25
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	11.66	16.19

Protein Annotations

ArrayExpress:VIT_00s0322g00030	EMBL:FN595543	EnsemblPlants:VIT_00s0322g00030.t01	EnsemblPlantsGene:VIT_00s0322g00030	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	PFAM:PF05637	ProteinID:CCB50141	ProteinID:CCB50141.1	UniParc:UPI000210A3F6
UniProt:F6HD46	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:23215134..23216854

Molecular Weight (calculated)

39785.8 Da

IEP (calculated)

8.176

GRAVY (calculated)

-0.683

Length

343 amino acids

Sequence
(BLAST)

001: MVPWWGLIYN AAFRGFVSTD ANSGSESQSR KERSVAKFLI AIFSGEERYK NATSQMGVNL RHDPPDPTFY DNPKTSYKIG TPVKNWDEKR REWLKLHPSF
101: AAGAGERILM LTGSQPTPCK NPIGDHFLLR FFKNKVDYCR IHGYDIFYNN WSLDFMEVWA SMGPQAPDYD KWGKTLTSTF KDKMFPESDD QSGLVYLLVK
201: EKDKWAEKIY LESQYYFEGY WEEIVGTLDN ITSKYLEIEK GVNTLRRRHA EKVSESYAEQ REPYLKKAGN GRYSWRRPFI THFTGCQPCS GKHNQMYAGE
301: SCWNSMQKAL NFADNQVLRN FGFVHPDLLD SSTVTPLPFD YPA

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.