CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

nucleus 1
plastid 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49440	Canola	golgi	98.88	98.88
AT2G22900.1	Thale cress	plastid	88.62	88.42
CDX72649	Canola	golgi	76.12	77.85
CDY29577	Canola	golgi	75.89	77.63
PGSC0003DMT400055223	Potato	golgi	60.94	62.05
PGSC0003DMT400023470	Potato	endoplasmic reticulum	36.83	61.11
KRH28334	Soybean	plastid	59.38	58.85
Solyc03g043920.2.1	Tomato	golgi	53.79	58.21
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	58.26	58.13
VIT_00s0322g00030.t01	Wine grape	mitochondrion	43.3	56.56
GSMUA_Achr3P30030_001	Banana	golgi	46.21	52.14
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	51.56	52.03
HORVU6Hr1G071920.1	Barley	golgi	47.99	50.35
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	47.54	50.24
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	48.44	48.87
Os02t0723200-01	Rice	mitochondrion	48.66	48.77
EES07343	Sorghum	golgi	48.21	48.76
TraesCS6D01G266700.1	Wheat	plastid	47.77	46.52
Zm00001d052625_P001	Maize	plastid	45.54	46.26
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	45.09	45.39
EES08636	Sorghum	plastid	45.09	44.99
TraesCSU01G194500.1	Wheat	golgi	45.31	44.32
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	46.21	43.22
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	45.31	42.83
Zm00001d052628_P001	Maize	plasma membrane	45.76	42.8
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	45.76	42.8
TraesCS6B01G078800.1	Wheat	plastid	44.87	42.49
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	44.64	42.19
Os11t0546500-00	Rice	golgi, peroxisome, plastid	45.31	42.03
Zm00001d052627_P001	Maize	plastid	42.63	41.7
OQU83607	Sorghum	plastid	42.63	41.43
CDX73082	Canola	cytosol	18.53	37.39
CDX96540	Canola	cytosol	18.53	37.39
CDX68187	Canola	cytosol	18.53	37.22
CDX85826	Canola	cytosol	18.53	37.22
CDY49114	Canola	peroxisome	11.38	36.43
CDX69995	Canola	cytosol	35.94	35.38
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	19.42	35.22
CDX99024	Canola	cytosol, golgi, peroxisome, plastid	35.27	34.8
CDY19235	Canola	cytosol, golgi, plasma membrane, plastid	34.6	34.29
CDX90935	Canola	mitochondrion	33.48	33.41
CDY70090	Canola	mitochondrion	26.34	33.33
CDY11442	Canola	cytosol, extracellular, mitochondrion, plastid	6.25	32.94
CDX93965	Canola	mitochondrion	33.48	32.75
CDY70418	Canola	golgi, mitochondrion	33.48	32.61
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	35.04	32.57
CDY22055	Canola	mitochondrion	32.59	32.52
CDY50378	Canola	cytosol	32.59	31.13
CDY18017	Canola	mitochondrion	21.43	28.66
CDX97271	Canola	mitochondrion	16.74	27.88
CDY65940	Canola	mitochondrion	15.4	25.94
CDX76657	Canola	mitochondrion	10.94	25.52
CDY11443	Canola	cytosol	3.35	25.42
CDY11441	Canola	mitochondrion	8.71	20.63

Protein Annotations

MapMan:21.2.3.1.3	Gene3D:3.90.550.10	GO:A0A078CJH2	EnsemblPlants:CDX76887	ProteinID:CDX76887	ProteinID:CDX76887.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00127406001	InterPro:Glyco_trans_34	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	TMHMM:TMhelix	UniParc:UPI0004EE7851	SEG:seg

Description

BnaC08g34730D

Coordinates

chrLK031808:+:1762113..1764092

Molecular Weight (calculated)

51967.6 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.445

Length

448 amino acids

Sequence
(BLAST)

001: MVSPEASHFQ SSPMAKYAGA RARPVICFND VVLFLGGAFM SLILVWSFFS FSNSPNLTFS ADKTDASTKC TRGIDMRYDP TDPVFYDDPD LSYTIEKPVK
101: NWDEKRKRWL ELHPSFIPGS ENRTVMITGS QSGPCKNPIG DHLLLRFFKN KVDYCRIHGH DIFYSNALLH PKMKSFWAKL PAVKAAMIAH PEAEWIWWVD
201: SDALFTDMDF TPPFHRYRNH NLVVHGWPGV VYDDRSWTAL NAGVFLIRNC QWSMELIDTW TSMGPVSPDF AKWGEIQRSI FKDKLFPESD DQTALIYLLF
301: KHKEVYYPKI YLEGEYYFEG YWLEIVPGLA NITERYLEME REDATLRRRH AEKVSERYAA FREERFLRGE SGGKGSKRRP FVTHFTGCQP CSGDHNTMYD
401: GDTCWNGMIK AINFADNQVM RRYGFVHSDL GKTSPLQPVP FDYPDEPW

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.