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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • mitochondrion 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, plastid
BaCelLo:cytosol
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009305.1-P Field mustard cytosol 99.78 99.78
CDX99024 Canola cytosol, golgi, peroxisome, plastid 96.92 97.14
CDX73082 Canola cytosol 43.74 89.64
CDX96540 Canola cytosol 43.74 89.64
AT5G07720.1 Thale cress cytosol, plastid 89.45 89.06
CDX68187 Canola cytosol 43.3 88.34
CDX85826 Canola cytosol 43.3 88.34
CDY49114 Canola peroxisome 25.05 81.43
HORVU6Hr1G040960.1 Barley cytosol 40.88 77.5
VIT_17s0000g06590.t01 Wine grape cytosol, golgi, plasma membrane, plastid 76.48 77.33
KRH03516 Soybean mitochondrion 74.95 76.29
KRH56886 Soybean endoplasmic reticulum 74.95 76.29
PGSC0003DMT400073000 Potato cytosol 40.0 75.52
PGSC0003DMT400041333 Potato plastid 73.85 74.01
PGSC0003DMT400063414 Potato plastid 72.97 73.78
Solyc03g115740.1.1 Tomato plastid 72.09 72.89
CDY19235 Canola cytosol, golgi, plasma membrane, plastid 72.31 72.79
CDY26738 Canola golgi, mitochondrion, plasma membrane, plastid 73.41 69.29
Solyc05g013020.1.1 Tomato golgi, mitochondrion, plastid 65.93 67.11
GSMUA_Achr10P... Banana cytosol 63.96 67.05
TraesCS5B01G128600.1 Wheat golgi, mitochondrion 63.52 64.94
HORVU5Hr1G042000.1 Barley golgi, mitochondrion 63.08 64.79
TraesCS5D01G137300.1 Wheat golgi, mitochondrion 63.08 64.49
TraesCS5A01G129800.1 Wheat mitochondrion 63.08 64.49
GSMUA_Achr3P22760_001 Banana cytosol 64.84 64.27
Zm00001d016687_P001 Maize plasma membrane 67.03 63.81
EES06903 Sorghum plastid 66.59 63.12
TraesCS6D01G181200.1 Wheat plastid 66.15 62.97
TraesCS6B01G221000.1 Wheat plastid 65.93 62.76
TraesCS6A01G196600.1 Wheat plastid 65.93 62.76
Os02t0529600-01 Rice golgi, peroxisome, plastid 65.93 62.5
Os12t0149300-01 Rice golgi 60.66 59.23
GSMUA_Achr10P... Banana plastid 64.18 57.94
Zm00001d023399_P001 Maize golgi, mitochondrion 56.92 56.8
Zm00001d023417_P001 Maize golgi, mitochondrion 56.7 56.58
EES16639 Sorghum golgi 57.58 56.34
GSMUA_Achr11P... Banana cytosol 62.2 55.71
CDY22055 Canola mitochondrion 54.73 55.46
CDX90935 Canola mitochondrion 53.85 54.57
CDY70090 Canola mitochondrion 41.76 53.67
CDY50378 Canola cytosol 55.16 53.52
CDX93965 Canola mitochondrion 53.63 53.28
CDY70418 Canola golgi, mitochondrion 53.41 52.83
CDY11442 Canola cytosol, extracellular, mitochondrion, plastid 9.45 50.59
CDY18017 Canola mitochondrion 37.14 50.45
CDX97271 Canola mitochondrion 29.45 49.81
CDY65940 Canola mitochondrion 26.81 45.86
EES15672 Sorghum mitochondrion 48.57 42.91
CDX76657 Canola mitochondrion 18.02 42.71
Zm00001d023398_P001 Maize mitochondrion 47.25 41.91
Zm00001d043041_P001 Maize nucleus 26.15 40.34
CDY11441 Canola mitochondrion 15.6 37.57
CDY11443 Canola cytosol 4.84 37.29
CDY29577 Canola golgi 34.95 36.3
CDX72649 Canola golgi 34.95 36.3
CDX76887 Canola golgi, plastid 35.38 35.94
CDY49440 Canola golgi 35.16 35.71
Zm00001d023418_P001 Maize nucleus 47.69 21.05
Protein Annotations
EnsemblPlants:CDX69995EnsemblPlantsGene:GSBRNA2T00136085001Gene3D:3.90.550.10GO:A0A078BZ37GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_34
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR31311PANTHER:PTHR31311:SF4PFAM:PF05637ProteinID:CDX69995
ProteinID:CDX69995.1SEG:segUniParc:UPI0004EE2FA0MapMan:21.2.1.1.2::
Description
BnaA10g23440D
Coordinates
chrLK031790:-:2620937..2622743
Molecular Weight (calculated)
51758.3 Da
IEP (calculated)
8.060
GRAVY (calculated)
-0.376
Length
455 amino acids
Sequence
(BLAST)
001: MGKEDGFKTQ KRVSTSASAG VLPTTIATPG GRKPPPRGKQ IKKTFNNLKM TILCGLVTIL VLRGTIGVNF GTSEADAVNQ NLIEETNRLL AEIRSDSDPT
101: DPNDPPDSDL DLNATYTLGP KITNWDKQRA TWLTQNPNFP SSLAGKPRVL LLTGSPPKPC DNPIGDHYLL KSVKNKIDYC RIHGIEIVYN MAHLDKELAG
201: YWAKLPMLRR LMLSHPEIEW IWWMDSDALF TDMVFEVPLS RYENHNLVIH GYPDLLYDQK SWIALNTGSF LFRNCQWSLD LLDVWAPMGP KGPIREEAGK
301: VLTAFLKGRP AFEADDQSAL IYLLLSEKDT WMGKVFVENQ YYLHGFWEGL VDRYEEMMDK YHPGLGDERW PFVTHFVGCK PCGSYADYAV EHCLKSMERA
401: YNFADNQVLK LYGFGHRGLL SPKIKRIRNE TISPLKFVNR FDIRRAAPLK IEARS
Best Arabidopsis Sequence Match ( AT5G07720.1 )
(BLAST)
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
Arabidopsis Description
XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.