Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016687_P001 | golgi |
| Zm00001d023398_P001 | golgi |
| Zm00001d023399_P001 | golgi |
| Zm00001d023417_P001 | golgi |
| Zm00001d023418_P001 | golgi |
| Zm00001d043041_P001 | golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023398_P001 | Maize | mitochondrion | 82.71 | 47.56 |
| EES15672 | Sorghum | mitochondrion | 72.2 | 41.36 |
| CDY49114 | Canola | peroxisome | 17.63 | 37.14 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 47.46 | 31.46 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 47.46 | 31.46 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 47.12 | 31.24 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 46.78 | 31.15 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 46.78 | 30.26 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 46.78 | 30.26 |
| Os12t0149300-01 | Rice | golgi | 47.8 | 30.26 |
| GSMUA_Achr10P... | Banana | cytosol | 43.05 | 29.26 |
| Zm00001d047647_P001 | Maize | mitochondrion | 36.61 | 29.11 |
| Zm00001d047654_P001 | Maize | golgi, plasma membrane | 20.0 | 28.23 |
| GSMUA_Achr3P22760_001 | Banana | cytosol | 43.39 | 27.89 |
| Zm00001d047657_P001 | Maize | mitochondrion | 16.61 | 27.53 |
| Zm00001d016687_P001 | Maize | plasma membrane | 44.41 | 27.41 |
| Solyc03g115740.1.1 | Tomato | plastid | 40.68 | 26.67 |
| PGSC0003DMT400063414 | Potato | plastid | 40.68 | 26.67 |
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 40.68 | 26.55 |
| KRH03516 | Soybean | mitochondrion | 40.0 | 26.4 |
| VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 40.0 | 26.22 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 40.34 | 26.21 |
| KRH56886 | Soybean | endoplasmic reticulum | 39.66 | 26.17 |
| CDX69995 | Canola | cytosol | 40.34 | 26.15 |
| Bra009305.1-P | Field mustard | cytosol | 40.34 | 26.15 |
| Bra015915.1-P | Field mustard | plastid | 40.34 | 26.1 |
| AT1G74380.1 | Thale cress | plastid | 40.34 | 26.04 |
| Zm00001d051264_P001 | Maize | mitochondrion, plastid | 34.92 | 25.94 |
| Zm00001d035801_P001 | Maize | mitochondrion, nucleus, plastid | 16.95 | 25.91 |
| AT5G07720.1 | Thale cress | cytosol, plastid | 40.0 | 25.82 |
| Bra003804.1-P | Field mustard | plastid | 40.0 | 25.82 |
| PGSC0003DMT400073000 | Potato | cytosol | 20.68 | 25.31 |
| Zm00001d026023_P001 | Maize | endoplasmic reticulum, golgi | 22.71 | 25.28 |
| CDX96540 | Canola | cytosol | 18.98 | 25.23 |
| CDX73082 | Canola | cytosol | 18.98 | 25.23 |
| CDX68187 | Canola | cytosol | 18.98 | 25.11 |
| CDX85826 | Canola | cytosol | 18.98 | 25.11 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 41.02 | 25.1 |
| GSMUA_Achr11P... | Banana | cytosol | 43.05 | 25.0 |
| Zm00001d047648_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 23.39 | 24.91 |
| PGSC0003DMT400041333 | Potato | plastid | 38.31 | 24.89 |
| Bra008146.1-P | Field mustard | cytosol | 18.64 | 24.66 |
| Zm00001d039763_P001 | Maize | golgi, mitochondrion | 37.29 | 24.5 |
| GSMUA_Achr10P... | Banana | plastid | 41.69 | 24.4 |
| Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 36.61 | 24.16 |
| Zm00001d025851_P001 | Maize | cytosol | 29.49 | 24.03 |
| Zm00001d028874_P001 | Maize | golgi | 36.95 | 23.96 |
| Bra025677.1-P | Field mustard | golgi, mitochondrion, plasma membrane, plastid | 40.0 | 23.46 |
| Zm00001d023418_P001 | Maize | nucleus | 81.36 | 23.28 |
| Zm00001d028811_P001 | Maize | plasma membrane | 35.25 | 23.27 |
| Zm00001d047694_P001 | Maize | golgi | 35.25 | 23.21 |
| AT1G18690.4 | Thale cress | golgi, plastid | 40.34 | 23.2 |
| Zm00001d052625_P001 | Maize | plastid | 30.51 | 20.41 |
| Zm00001d051681_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 30.51 | 20.27 |
| Zm00001d052628_P001 | Maize | plasma membrane | 31.86 | 19.62 |
| Zm00001d052627_P001 | Maize | plastid | 29.49 | 19.0 |
Protein Annotations
| EnsemblPlants:Zm00001d043041_P001 | EnsemblPlants:Zm00001d043041_T001 | EnsemblPlantsGene:Zm00001d043041 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF8 | PFAM:PF05637 | ProteinID:ONM36759.1 |
| SEG:seg | UniParc:UPI000842E625 | UniProt:A0A1D6N847 | MapMan:35.1 | : | : |
Description
Probable xyloglucan 6-xylosyltransferase 5
Coordinates
chr3:+:187197753..187198778
Molecular Weight (calculated)
32641.2 Da
IEP (calculated)
8.875
GRAVY (calculated)
-0.599
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSDDDPDA GPDDNDEAPT STSSSAATGD HYDCGAAWTT ANYRLQPRVT RWKAKRRRWL HQNPGFPSRD ARGGPRVLLV TASPQGPCGS PDGDRFLLRA
101: TKNRLDYCRL HGVDMVHATA RLEDPELRSA GYGDGWAKLA LLRRLMLAHP EVEWLWWLDV GALVTDMGFE LPLARYEGAH LVVRGDSYQL FQRRAWDAAS
201: TASFLLRNCQ WSLDLLDAWV VMAPKGRARH DAGELLTATL AGRPTTSPRL YTCSSPRRSG GWTGCTSRTS TTCTASGRRW SAREGHGEAP PGVRR
101: TKNRLDYCRL HGVDMVHATA RLEDPELRSA GYGDGWAKLA LLRRLMLAHP EVEWLWWLDV GALVTDMGFE LPLARYEGAH LVVRGDSYQL FQRRAWDAAS
201: TASFLLRNCQ WSLDLLDAWV VMAPKGRARH DAGELLTATL AGRPTTSPRL YTCSSPRRSG GWTGCTSRTS TTCTASGRRW SAREGHGEAP PGVRR
001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
Arabidopsis Description
XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]
SUBAcon: [golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.