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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 4
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003804.1-P golgi
Bra008146.1-P golgi
Bra015915.1-P golgi

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G74380.1 Bra003804.1-P AT1G74380.1 22665445
AT1G74380.1 Bra008146.1-P AT1G74380.1 22665445
AT1G74380.1 Bra015915.1-P AT1G74380.1 22665445
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49114 Canola peroxisome 55.16 87.86
PGSC0003DMT400073000 Potato cytosol 69.51 64.32
HORVU6Hr1G040960.1 Barley cytosol 68.61 63.75
AT1G74380.1 Thale cress plastid 95.52 46.61
Bra003804.1-P Field mustard plastid 95.52 46.61
Bra015915.1-P Field mustard plastid 95.07 46.49
VIT_17s0000g06590.t01 Wine grape cytosol, golgi, plasma membrane, plastid 87.0 43.11
Bra009305.1-P Field mustard cytosol 86.55 42.42
KRH56886 Soybean endoplasmic reticulum 83.86 41.83
KRH03516 Soybean mitochondrion 83.86 41.83
PGSC0003DMT400041333 Potato plastid 80.27 39.43
GSMUA_Achr10P... Banana cytosol 76.23 39.17
PGSC0003DMT400063414 Potato plastid 78.92 39.11
Bra025677.1-P Field mustard golgi, mitochondrion, plasma membrane, plastid 87.89 38.97
Solyc03g115740.1.1 Tomato plastid 78.03 38.67
Solyc05g013020.1.1 Tomato golgi, mitochondrion, plastid 76.68 38.26
GSMUA_Achr3P22760_001 Banana cytosol 76.68 37.25
Zm00001d016687_P001 Maize plasma membrane 78.48 36.61
EES06903 Sorghum plastid 78.48 36.46
Os02t0529600-01 Rice golgi, peroxisome, plastid 78.03 36.25
TraesCS5B01G128600.1 Wheat golgi, mitochondrion 71.75 35.96
TraesCS5D01G137300.1 Wheat golgi, mitochondrion 71.3 35.73
TraesCS5A01G129800.1 Wheat mitochondrion 71.3 35.73
HORVU5Hr1G042000.1 Barley golgi, mitochondrion 70.85 35.67
TraesCS6D01G181200.1 Wheat plastid 75.78 35.36
TraesCS6A01G196600.1 Wheat plastid 75.78 35.36
TraesCS6B01G221000.1 Wheat plastid 75.34 35.15
Os12t0149300-01 Rice golgi 72.2 34.55
GSMUA_Achr10P... Banana plastid 77.13 34.13
GSMUA_Achr11P... Banana cytosol 76.23 33.46
Bra036262.1-P Field mustard mitochondrion 67.26 32.47
Bra000877.1-P Field mustard mitochondrion 66.82 32.18
Bra018545.1-P Field mustard mitochondrion 65.92 31.82
Zm00001d023399_P001 Maize golgi, mitochondrion 64.57 31.58
EES16639 Sorghum golgi 65.47 31.4
Bra007696.1-P Field mustard mitochondrion 64.13 31.36
Zm00001d023417_P001 Maize golgi, mitochondrion 64.13 31.36
Bra014396.1-P Field mustard mitochondrion 63.23 30.72
EES15672 Sorghum mitochondrion 56.5 24.47
Zm00001d023398_P001 Maize mitochondrion 55.16 23.98
Bra017847.1-P Field mustard golgi 37.22 18.95
Zm00001d043041_P001 Maize nucleus 24.66 18.64
Bra039938.1-P Field mustard golgi, plastid 36.77 18.3
Zm00001d023418_P001 Maize nucleus 56.05 12.12
Protein Annotations
EnsemblPlants:Bra008146.1EnsemblPlants:Bra008146.1-PEnsemblPlantsGene:Bra008146GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_34PANTHER:PTHR31311
PANTHER:PTHR31311:SF4PFAM:PF05637UniParc:UPI0002545950UniProt:M4CV99MapMan:35.1:
Description
AT1G74380 (E=3e-109) XXT5 | XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5); transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase
Coordinates
chrA02:+:13408999..13409785
Molecular Weight (calculated)
26001.5 Da
IEP (calculated)
7.971
GRAVY (calculated)
-0.337
Length
223 amino acids
Sequence
(BLAST)
001: MAHLDKELAG YWAKLPMIRR LMLSHPEKSW IALNTGSFLL RNCQWSLDLL DAWAPMGPKG VIRDEAGKVL TGYLKGRPAF EADDQSALIY LLLSQKDMWM
101: EKVFVENQYY LHGFWEGLVD RYEEMVEKYH PGLGDERWPF VTHFVGCKPC GSYADYAVER CLRSMERAFN FADNQVLKLY GFGHRGLLSP KIKRIRNETV
201: TPLEFVDKFD IRRTIQVETK LQN
Best Arabidopsis Sequence Match ( AT1G18690.1 )
(BLAST)
001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
Arabidopsis Description
XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.