Factsheet for GSMUA_Achr10P15550_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
golgi 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...	golgi
GSMUA_Achr10P...	golgi
GSMUA_Achr11P...	golgi
GSMUA_Achr3P22760_001	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74380.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT1G74380.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT1G74380.1	GSMUA_Achr11P...	AT1G74380.1	22665445
AT1G74380.1	GSMUA_Achr3P22760_001	AT1G74380.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G040960.1	Barley	cytosol	37.9	79.58
CDX96540	Canola	cytosol	34.72	78.83
CDX73082	Canola	cytosol	34.72	78.83
GSMUA_Achr10P...	Banana	cytosol	67.86	78.8
CDX85826	Canola	cytosol	34.33	77.58
CDX68187	Canola	cytosol	34.33	77.58
Bra008146.1-P	Field mustard	cytosol	34.13	77.13
CDY49114	Canola	peroxisome	21.03	75.71
GSMUA_Achr3P22760_001	Banana	cytosol	68.25	74.95
PGSC0003DMT400073000	Potato	cytosol	34.52	72.2
GSMUA_Achr11P...	Banana	cytosol	70.04	69.49
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	61.51	68.89
KRH03516	Soybean	mitochondrion	60.71	68.46
KRH56886	Soybean	endoplasmic reticulum	60.71	68.46
Bra015915.1-P	Field mustard	plastid	61.9	68.42
PGSC0003DMT400041333	Potato	plastid	61.51	68.28
AT1G74380.1	Thale cress	plastid	61.51	67.83
PGSC0003DMT400063414	Potato	plastid	60.32	67.56
Solyc03g115740.1.1	Tomato	plastid	60.12	67.33
Bra003804.1-P	Field mustard	plastid	60.91	67.18
Os02t0529600-01	Rice	golgi, peroxisome, plastid	63.69	66.88
Zm00001d016687_P001	Maize	plasma membrane	63.1	66.53
EES06903	Sorghum	plastid	62.9	66.04
TraesCS6D01G181200.1	Wheat	plastid	61.9	65.27
TraesCS6B01G221000.1	Wheat	plastid	61.9	65.27
TraesCS6A01G196600.1	Wheat	plastid	61.9	65.27
AT5G07720.1	Thale cress	cytosol, plastid	59.13	65.21
CDX99024	Canola	cytosol, golgi, peroxisome, plastid	58.13	64.54
CDX69995	Canola	cytosol	57.94	64.18
Bra009305.1-P	Field mustard	cytosol	57.94	64.18
TraesCS5A01G129800.1	Wheat	mitochondrion	55.75	63.15
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	55.56	62.92
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	55.56	62.92
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	54.96	62.53
CDY19235	Canola	cytosol, golgi, plasma membrane, plastid	55.75	62.17
Os12t0149300-01	Rice	golgi	57.14	61.8
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	53.57	60.4
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	56.15	58.71
EES16639	Sorghum	golgi	53.77	58.28
Zm00001d023399_P001	Maize	golgi, mitochondrion	52.58	58.11
GSMUA_Achr8P22410_001	Banana	golgi, mitochondrion	49.4	58.04
Zm00001d023417_P001	Maize	golgi, mitochondrion	52.38	57.89
GSMUA_Achr1P24760_001	Banana	mitochondrion	49.6	57.87
AT1G18690.4	Thale cress	golgi, plastid	57.74	56.73
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	56.55	56.66
EES15672	Sorghum	mitochondrion	44.84	43.88
Zm00001d023398_P001	Maize	mitochondrion	43.65	42.88
GSMUA_Achr3P30030_001	Banana	golgi	33.13	42.07
Zm00001d043041_P001	Maize	nucleus	24.4	41.69
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	33.13	37.61
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	32.14	36.4
Zm00001d023418_P001	Maize	nucleus	43.06	21.05

Protein Annotations

EnsemblPlants:GSMUA_Achr10P15550_001	EnsemblPlants:GSMUA_Achr10T15550_001	EnsemblPlantsGene:GSMUA_Achr10G15550_001	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF4	PFAM:PF05637	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002948CDD	UniProt:M0RII1	MapMan:21.2.1.1.2	:	:

Description

Putative glycosyltransferase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G15550_001]

Coordinates

chr10:-:23442718..23452368

Molecular Weight (calculated)

56822.9 Da

IEP (calculated)

8.567

GRAVY (calculated)

-0.280

Length

504 amino acids

Sequence
(BLAST)

001: MGQEGAASKA AARSGGGSLP ASSRSGRLPR GRKIQKAFNN LKITVLCGFV TILVLRGTIG IGSLAGAGGD ASEAADQRQQ QFLSLNSTTA TRDGGGNATD
101: ITSAVVANYT LGPKISDWDS QRRRWLSENP GFPNLVEGGK PRILLVTGSP PNPCDNATGD HYLLKAIKNK IDYCRLHGIE IVYNMAHLDR ELAGYWAKLP
201: LIRRLMLSHP EVEWIWWMDS DALFTDMAFE IPLPRYDAHN LVVHGYPDLI FDQHSWIGLN TGSFLLRNCQ WSLDLLDAWA PMGPKGPVRD EAGKILTASL
301: KGRPAFEADD QSALIYLLLS QQDKWGNKVF IENSYYLHGY WAGLVDRYEE MMEKYHPGLG DERWPFVTHF VGCKPCGSYG DYPVERCLGS MERAFNFADN
401: QILRIYGFAH RGLASSNIKR IKRQTTRPLE VKEQLNLGAR ISIGSTIWLF DPDLCWRWWW AGSRIMISSN SWKTLIRFFK YNNMYNYGIY KDELGVSYYC
501: FIPF

Best Arabidopsis Sequence Match ( AT1G74380.1 )
(BLAST)

001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

Arabidopsis Description

XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.