Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | golgi |
| GSMUA_Achr10P... | golgi |
| GSMUA_Achr11P... | golgi |
| GSMUA_Achr3P22760_001 | golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P22760_001 | Banana | cytosol | 86.18 | 81.48 |
| HORVU6Hr1G040960.1 | Barley | cytosol | 44.24 | 80.0 |
| CDX73082 | Canola | cytosol | 39.86 | 77.93 |
| CDX96540 | Canola | cytosol | 39.86 | 77.93 |
| GSMUA_Achr11P... | Banana | cytosol | 90.32 | 77.17 |
| CDX68187 | Canola | cytosol | 39.4 | 76.68 |
| CDX85826 | Canola | cytosol | 39.4 | 76.68 |
| Bra008146.1-P | Field mustard | cytosol | 39.17 | 76.23 |
| CDY49114 | Canola | peroxisome | 23.73 | 73.57 |
| PGSC0003DMT400073000 | Potato | cytosol | 39.4 | 70.95 |
| GSMUA_Achr10P... | Banana | plastid | 78.8 | 67.86 |
| VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 70.05 | 67.56 |
| Zm00001d016687_P001 | Maize | plasma membrane | 72.81 | 66.11 |
| Os02t0529600-01 | Rice | golgi, peroxisome, plastid | 73.04 | 66.04 |
| EES06903 | Sorghum | plastid | 72.58 | 65.62 |
| KRH03516 | Soybean | mitochondrion | 67.51 | 65.55 |
| Bra015915.1-P | Field mustard | plastid | 68.66 | 65.35 |
| KRH56886 | Soybean | endoplasmic reticulum | 67.28 | 65.32 |
| AT1G74380.1 | Thale cress | plastid | 68.43 | 64.99 |
| TraesCS6D01G181200.1 | Wheat | plastid | 71.43 | 64.85 |
| TraesCS6B01G221000.1 | Wheat | plastid | 71.43 | 64.85 |
| TraesCS6A01G196600.1 | Wheat | plastid | 71.43 | 64.85 |
| PGSC0003DMT400063414 | Potato | plastid | 66.82 | 64.44 |
| PGSC0003DMT400041333 | Potato | plastid | 67.05 | 64.1 |
| Solyc03g115740.1.1 | Tomato | plastid | 66.36 | 64.0 |
| Bra009305.1-P | Field mustard | cytosol | 67.05 | 63.96 |
| CDX69995 | Canola | cytosol | 67.05 | 63.96 |
| AT5G07720.1 | Thale cress | cytosol, plastid | 67.28 | 63.9 |
| Bra003804.1-P | Field mustard | plastid | 67.28 | 63.9 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 66.82 | 63.88 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 64.75 | 63.15 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 64.52 | 62.92 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 64.52 | 62.92 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 64.06 | 62.75 |
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 62.44 | 59.96 |
| Os12t0149300-01 | Rice | golgi | 64.29 | 59.87 |
| Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 60.37 | 58.61 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 63.82 | 57.47 |
| GSMUA_Achr8P22410_001 | Banana | golgi, mitochondrion | 56.68 | 57.34 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 59.68 | 56.8 |
| GSMUA_Achr1P24760_001 | Banana | mitochondrion | 56.45 | 56.71 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 59.22 | 56.36 |
| EES16639 | Sorghum | golgi | 59.91 | 55.91 |
| Bra025677.1-P | Field mustard | golgi, mitochondrion, plasma membrane, plastid | 63.59 | 54.87 |
| AT1G18690.4 | Thale cress | golgi, plastid | 64.06 | 54.19 |
| EES15672 | Sorghum | mitochondrion | 51.15 | 43.11 |
| Zm00001d043041_P001 | Maize | nucleus | 29.26 | 43.05 |
| Zm00001d023398_P001 | Maize | mitochondrion | 49.31 | 41.72 |
| GSMUA_Achr3P30030_001 | Banana | golgi | 37.33 | 40.81 |
| GSMUA_Achr3P30020_001 | Banana | cytosol, golgi, plastid | 38.25 | 37.39 |
| GSMUA_Achr1P12580_001 | Banana | golgi, plastid, vacuole | 36.18 | 35.28 |
| Zm00001d023418_P001 | Maize | nucleus | 49.31 | 20.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P10260_001 | EnsemblPlants:GSMUA_Achr10T10260_001 | EnsemblPlantsGene:GSMUA_Achr10G10260_001 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF4 | PFAM:PF05637 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000295953B | UniProt:M0RH02 | MapMan:21.2.1.1.2 | : | : |
Description
Putative glycosyltransferase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G10260_001]
Coordinates
chr10:-:19854221..19855591
Molecular Weight (calculated)
49215.0 Da
IEP (calculated)
8.267
GRAVY (calculated)
-0.375
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQEATGYKT PPERDRLDAA RTRAPRRRQI RKTFNNLKIT VLCGVVTILV LRGTIGIGSL AGAGGEADDQ KVIPFGFNST AAALNYTSAS VLAAAANYTL
101: GPRISDWDEQ RRRWLGENPG FPSRTFGLKP RILLVTGSPP NPCDNPIGDH YLLKGTKNKI DYCRLHGIEI VYNMAHLDRE LAGYWAKLPL IRRLMLSHPE
201: VEWIWWMDSD ALFTDMAFEI PLDRYAAHNL VVHGYPDLIF EKHSWIGLNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE AGKILTANLQ GRPAFEADDQ
301: SALIYLVLSQ QDRWGDKIYI ENSYYLHGYW AGLVDRYEEM MDKHHPGLGD ERWPFVTHFV GCKPCGSYGD YPVERCLSSM ERAFNFADNQ VLRMYGFAHG
401: KLSSPKIKRT RKQTAKPLEF LDHLNLEARI ETRG
101: GPRISDWDEQ RRRWLGENPG FPSRTFGLKP RILLVTGSPP NPCDNPIGDH YLLKGTKNKI DYCRLHGIEI VYNMAHLDRE LAGYWAKLPL IRRLMLSHPE
201: VEWIWWMDSD ALFTDMAFEI PLDRYAAHNL VVHGYPDLIF EKHSWIGLNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE AGKILTANLQ GRPAFEADDQ
301: SALIYLVLSQ QDRWGDKIYI ENSYYLHGYW AGLVDRYEEM MDKHHPGLGD ERWPFVTHFV GCKPCGSYGD YPVERCLSSM ERAFNFADNQ VLRMYGFAHG
401: KLSSPKIKRT RKQTAKPLEF LDHLNLEARI ETRG
001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
Arabidopsis Description
XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.