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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • golgi 1
  • cytosol 1
  • plastid 1
  • peroxisome 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0529600-01 golgi
Os12t0149300-01 golgi

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G040960.1 Barley cytosol 46.88 93.75
Zm00001d016687_P001 Maize plasma membrane 89.58 89.96
EES06903 Sorghum plastid 89.17 89.17
TraesCS6B01G221000.1 Wheat plastid 87.92 88.28
TraesCS6D01G181200.1 Wheat plastid 87.71 88.08
TraesCS6A01G196600.1 Wheat plastid 87.5 87.87
CDX85826 Canola cytosol 36.46 78.48
CDX68187 Canola cytosol 36.46 78.48
CDX73082 Canola cytosol 36.25 78.38
CDX96540 Canola cytosol 36.25 78.38
Bra008146.1-P Field mustard cytosol 36.25 78.03
CDY49114 Canola peroxisome 22.29 76.43
GSMUA_Achr10P... Banana cytosol 66.04 73.04
PGSC0003DMT400073000 Potato cytosol 36.46 72.61
KRH56886 Soybean endoplasmic reticulum 64.38 69.13
KRH03516 Soybean mitochondrion 64.17 68.9
Bra015915.1-P Field mustard plastid 65.42 68.86
VIT_17s0000g06590.t01 Wine grape cytosol, golgi, plasma membrane, plastid 64.38 68.67
PGSC0003DMT400041333 Potato plastid 64.79 68.5
AT1G74380.1 Thale cress plastid 65.21 68.49
Bra003804.1-P Field mustard plastid 65.21 68.49
GSMUA_Achr3P22760_001 Banana cytosol 65.0 67.97
PGSC0003DMT400063414 Potato plastid 63.54 67.78
AT5G07720.1 Thale cress cytosol, plastid 64.38 67.61
Os12t0149300-01 Rice golgi 65.42 67.38
Solyc03g115740.1.1 Tomato plastid 62.92 67.11
CDX99024 Canola cytosol, golgi, peroxisome, plastid 62.92 66.52
CDX69995 Canola cytosol 62.5 65.93
Bra009305.1-P Field mustard cytosol 62.5 65.93
GSMUA_Achr10P... Banana plastid 66.88 63.69
CDY19235 Canola cytosol, golgi, plasma membrane, plastid 59.58 63.27
GSMUA_Achr11P... Banana cytosol 66.67 62.99
Os03t0300000-01 Rice cytosol 45.62 62.93
Solyc05g013020.1.1 Tomato golgi, mitochondrion, plastid 57.29 61.52
CDY26738 Canola golgi, mitochondrion, plasma membrane, plastid 60.83 60.58
Bra025677.1-P Field mustard golgi, mitochondrion, plasma membrane, plastid 60.83 58.05
AT1G18690.4 Thale cress golgi, plastid 60.83 56.92
Os03t0306100-00 Rice golgi 42.92 45.88
Os03t0305800-02 Rice golgi 42.08 41.82
Os02t0723200-01 Rice mitochondrion 32.29 34.68
Os11t0546500-00 Rice golgi, peroxisome, plastid 31.46 31.26
Protein Annotations
MapMan:21.2.1.1.2Gene3D:3.90.550.10EntrezGene:4329539EMBL:AK100984ProteinID:BAD25434.1ProteinID:BAF08928.1
ProteinID:BAS79020.1ProteinID:EEE57116.1GO:GO:0000139GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009969GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757GO:GO:0016758InterPro:Glyco_trans_34
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transEnsemblPlantsGene:Os02g0529600EnsemblPlants:Os02t0529600-01PFAM:PF05637PANTHER:PTHR31311
PANTHER:PTHR31311:SF4UniProt:Q6H765TMHMM:TMhelixUniParc:UPI00003B447FRefSeq:XP_015627055.1RefSeq:XP_015627056.1
SEG:seg:::::
Description
glycosyltransferase 2Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1). (Os02t0529600-01)
Coordinates
chr2:-:19451675..19453581
Molecular Weight (calculated)
53426.8 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.383
Length
480 amino acids
Sequence
(BLAST)
001: MGQEGMGYNN GKGGGGGGGG LPMTAPRPRG ASPLSSHGHH HRSRKIHRTF NNVKITVLCG LVTILVLRGT IGLNLSLPNQ PTDADALAGA KAVEDIDRIL
101: REIRSDGGAD DDAAAAGDLA GSFNATALNA TEAAAAYASA VERYALGPKI SDWDGQRRRW LRQNPGFPST VAGGKPRILL VTGSQPGPCD NPLGDHYLLK
201: TTKNKIDYCR LHGIEIVHNL AHLDTELAGY WAKLPLLRRL MLSHPEVEWI WWMDSDALFT DMAFELPLSR YQDRNLIIHG YQDLLFEKHS WIALNTGSFL
301: FRNCQWSLDL LDAWAPMGPK GFIRDEAGKI LTANLKGRPA FEADDQSALI YLLLSQKEKW MNKVFIENSY YLHGFWAGLV DKYEEMMENH HPGLGDERWP
401: FVTHFVGCKP CGSYGDYPVE RCLRSMERAF NFADNQVLRL YGFAHKGLES PKIKRVRNQT TKPIDDKENL DVKAKISTTS
Best Arabidopsis Sequence Match ( AT5G07720.1 )
(BLAST)
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
Arabidopsis Description
XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.