CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid, cytosol

Predictor Summary:

plastid 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane, plastid
Any Predictor:	golgi, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	94.69	88.8
CDX68187	Canola	cytosol	42.92	87.0
CDX85826	Canola	cytosol	42.92	87.0
CDX73082	Canola	cytosol	42.7	86.94
CDX96540	Canola	cytosol	42.7	86.94
CDY49114	Canola	peroxisome	24.34	78.57
HORVU6Hr1G040960.1	Barley	cytosol	40.27	75.83
AT1G18690.4	Thale cress	golgi, plastid	84.51	74.46
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	72.79	73.11
PGSC0003DMT400073000	Potato	cytosol	38.94	73.03
CDX69995	Canola	cytosol	72.79	72.31
CDX99024	Canola	cytosol, golgi, peroxisome, plastid	72.57	72.25
KRH56886	Soybean	endoplasmic reticulum	71.24	72.04
KRH03516	Soybean	mitochondrion	70.8	71.59
PGSC0003DMT400063414	Potato	plastid	69.69	70.0
Solyc03g115740.1.1	Tomato	plastid	69.03	69.33
PGSC0003DMT400041333	Potato	plastid	68.81	68.5
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	63.27	63.98
TraesCS5A01G129800.1	Wheat	mitochondrion	62.61	63.6
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	62.17	63.43
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	62.39	63.37
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	62.17	63.15
GSMUA_Achr10P...	Banana	cytosol	59.96	62.44
TraesCS6D01G181200.1	Wheat	plastid	63.5	60.04
TraesCS6A01G196600.1	Wheat	plastid	63.27	59.83
TraesCS6B01G221000.1	Wheat	plastid	63.27	59.83
Zm00001d016687_P001	Maize	plasma membrane	63.27	59.83
EES06903	Sorghum	plastid	63.5	59.79
Os02t0529600-01	Rice	golgi, peroxisome, plastid	63.27	59.58
GSMUA_Achr3P22760_001	Banana	cytosol	59.96	59.04
Os12t0149300-01	Rice	golgi	60.62	58.8
Zm00001d023399_P001	Maize	golgi, mitochondrion	56.42	55.92
EES16639	Sorghum	golgi	57.52	55.91
GSMUA_Achr10P...	Banana	plastid	62.17	55.75
Zm00001d023417_P001	Maize	golgi, mitochondrion	56.19	55.7
GSMUA_Achr11P...	Banana	cytosol	61.5	54.72
CDY22055	Canola	mitochondrion	50.44	50.78
CDX90935	Canola	mitochondrion	50.0	50.33
CDY70418	Canola	golgi, mitochondrion	50.66	49.78
CDY11442	Canola	cytosol, extracellular, mitochondrion, plastid	9.29	49.41
CDX93965	Canola	mitochondrion	49.78	49.13
CDY50378	Canola	cytosol	50.44	48.61
CDY70090	Canola	mitochondrion	37.17	47.46
CDY18017	Canola	mitochondrion	34.51	46.57
CDX97271	Canola	mitochondrion	26.77	44.98
CDX76657	Canola	mitochondrion	18.36	43.23
EES15672	Sorghum	mitochondrion	48.67	42.72
CDY11443	Canola	cytosol	5.53	42.37
Zm00001d023398_P001	Maize	mitochondrion	47.12	41.52
CDY65940	Canola	mitochondrion	24.34	41.35
Zm00001d043041_P001	Maize	nucleus	26.55	40.68
CDX72649	Canola	golgi	35.18	36.3
CDY29577	Canola	golgi	35.18	36.3
CDX76887	Canola	golgi, plastid	34.29	34.6
CDY49440	Canola	golgi	34.29	34.6
CDY11441	Canola	mitochondrion	13.72	32.8
Zm00001d023418_P001	Maize	nucleus	47.35	20.76

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	GO:A0A078FXV8	UniProt:A0A078FXV8	EnsemblPlants:CDY19235	ProteinID:CDY19235
ProteinID:CDY19235.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00006541001	InterPro:Glyco_trans_34	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF4	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0004EB41E8
SEG:seg	:	:	:	:	:

Description

BnaC05g14360DBnaC05g14360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXV8]

Coordinates

chrLK032093:+:410430..411788

Molecular Weight (calculated)

51354.7 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.310

Length

452 amino acids

Sequence
(BLAST)

001: MVQDALRTSG SGGGLPKTAV SNGGGRGRGL LLRGWQVQNT SMNIKIMILC GFVTILVLLG TVSFGNLGSS NADDAVNQNL IKETKPILAE SPSASVPNDL
101: DLEEPPKAEV NPNVTYTLGP RITNWDSQRK VWLNQNPGFP SIVNGKARIL LLTGSPPGPC DKPIGDYYLL KSVKNKIDYC RIHGIEIVYN MAHLDEELSG
201: YWTKLPMIRR LMLSHPEVEW IWWMDSDALF TDILFEIPLS RYEKHNLVIH GYPDLLFNQK SWVALNTGVF LLRNCQWSLD LLDAWAPMGP KGPIRNEAGK
301: VLTAYLKGRP AFEADDQSTL IYLLISHKEK WMEKVYVENQ YYLHGFWEGL VDKYEEMMER YHPGLGDERW PFVSHFVGCK PCGSYADYAE ERCFKGMERA
401: FNFADNQVLE LYGFSHRGLL SPKVKRIRNE TVSPFEYVDK FDIRRTHAEA KP

Best Arabidopsis Sequence Match ( AT1G18690.1 )
(BLAST)

001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP

Arabidopsis Description

XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.