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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • golgi 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:golgi, mitochondrion
MultiLoc:golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS5A01G129800.1 golgi
TraesCS5B01G128600.1 golgi
TraesCS5D01G137300.1 golgi
TraesCS6A01G196600.1 golgi
TraesCS6B01G221000.1 golgi
TraesCS6D01G181200.1 golgi

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G74380.1 TraesCS5A01G129800.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS5B01G128600.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS5D01G137300.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS6A01G196600.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS6B01G221000.1 AT1G74380.1 22665445
AT1G74380.1 TraesCS6D01G181200.1 AT1G74380.1 22665445
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G129800.1 Wheat mitochondrion 98.2 98.2
TraesCS5D01G137300.1 Wheat golgi, mitochondrion 98.2 98.2
HORVU5Hr1G042000.1 Barley golgi, mitochondrion 96.85 97.29
Os12t0149300-01 Rice golgi 80.45 76.82
CDX96540 Canola cytosol 36.4 72.97
CDX73082 Canola cytosol 36.4 72.97
CDX68187 Canola cytosol 36.4 72.65
CDX85826 Canola cytosol 36.4 72.65
Bra008146.1-P Field mustard cytosol 35.96 71.75
CDY49114 Canola peroxisome 22.47 71.43
PGSC0003DMT400073000 Potato cytosol 37.75 69.71
Zm00001d023417_P001 Maize golgi, mitochondrion 68.31 66.67
Zm00001d023399_P001 Maize golgi, mitochondrion 68.31 66.67
EES16639 Sorghum golgi 69.21 66.24
GSMUA_Achr10P... Banana cytosol 62.92 64.52
Bra015915.1-P Field mustard plastid 65.84 64.25
CDX99024 Canola cytosol, golgi, peroxisome, plastid 65.39 64.1
AT5G07720.1 Thale cress cytosol, plastid 65.62 63.9
AT1G74380.1 Thale cress plastid 65.39 63.68
Bra003804.1-P Field mustard plastid 65.39 63.68
VIT_17s0000g06590.t01 Wine grape cytosol, golgi, plasma membrane, plastid 64.27 63.56
CDX69995 Canola cytosol 64.94 63.52
Bra009305.1-P Field mustard cytosol 64.72 63.3
TraesCS6B01G221000.1 Wheat plastid 67.64 62.97
KRH03516 Soybean mitochondrion 62.92 62.64
KRH56886 Soybean endoplasmic reticulum 62.7 62.42
CDY19235 Canola cytosol, golgi, plasma membrane, plastid 63.37 62.39
PGSC0003DMT400063414 Potato plastid 62.02 61.33
GSMUA_Achr3P22760_001 Banana cytosol 63.15 61.22
Solyc03g115740.1.1 Tomato plastid 61.35 60.67
PGSC0003DMT400041333 Potato plastid 61.12 59.91
CDY26738 Canola golgi, mitochondrion, plasma membrane, plastid 64.27 59.34
Solyc05g013020.1.1 Tomato golgi, mitochondrion, plastid 58.2 57.94
Bra025677.1-P Field mustard golgi, mitochondrion, plasma membrane, plastid 64.49 57.06
GSMUA_Achr11P... Banana cytosol 64.04 56.1
GSMUA_Achr10P... Banana plastid 62.92 55.56
AT1G18690.4 Thale cress golgi, plastid 61.57 53.41
EES15672 Sorghum mitochondrion 57.98 50.1
Zm00001d023398_P001 Maize mitochondrion 56.85 49.32
TraesCS4B01G188100.1 Wheat golgi, mitochondrion 49.44 48.78
Zm00001d043041_P001 Maize nucleus 31.46 47.46
TraesCS1B01G115300.1 Wheat golgi, mitochondrion 49.66 47.32
TraesCS7B01G352300.1 Wheat golgi 42.02 43.09
TraesCS4B01G184600.1 Wheat endoplasmic reticulum, golgi, peroxisome 42.02 41.83
TraesCS6B01G315100.1 Wheat golgi, plasma membrane 33.93 35.61
TraesCS6B01G078800.1 Wheat plastid 35.06 32.98
TraesCS4B01G391200.1 Wheat endoplasmic reticulum 34.83 32.36
Zm00001d023418_P001 Maize nucleus 56.18 24.25
Protein Annotations
EnsemblPlants:TraesCS5B01G128600.1EnsemblPlantsGene:TraesCS5B01G128600Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_34InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPANTHER:PTHR31311PANTHER:PTHR31311:SF8PFAM:PF05637SEG:segTMHMM:TMhelix
MapMan:21.2.1.1.2:::::
Description
No Description!
Coordinates
chr5B:-:234903024..234904361
Molecular Weight (calculated)
49953.8 Da
IEP (calculated)
7.127
GRAVY (calculated)
-0.396
Length
445 amino acids
Sequence
(BLAST)
001: MAAGGLGRPG RPARGGNKQM QKTINNVKMT LICGFITILV LRGTVGINLM AFSGDGGGDA AADAKVAEDI ERILREIRSD SDPDDEDQLV VDASLSGNST
101: TMPVVEEKNY TLGPSITRWN AKRRQWLSQN PGFPSRDARG SPRILLVTGS SPGPCDNPAG DHYLLKSTKN KIDYCRLHGI EIVHNMVHLD RELSGYWSKL
201: PLLRRLMLSH PEVEWVWWMD SDALFTDMGF EIPLSRYEGS NLVIHGYPEL LNNQRSWVAL NTGSFLLRNC QWSMELLDAW APMGPKGRVR EAAGKVLTAS
301: LTGRPAFEAD DQSALIHLLL TEKDRWMEKV YVENQYYLHG FWAGLVDKYE EMMEKHHPGL GDERWPFITH FVGCKPCGSY GDYPVEQCLT GMERAFNFAD
401: NQVLRLYGFR HRSLTNPKVK PVANRTASPL VNKEASLKMD AKIET
Best Arabidopsis Sequence Match ( AT5G07720.1 )
(BLAST)
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
Arabidopsis Description
XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.