Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69995 | Canola | cytosol | 89.06 | 89.45 |
| Bra009305.1-P | Field mustard | cytosol | 89.06 | 89.45 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 88.84 | 89.43 |
| AT1G74380.1 | Thale cress | plastid | 82.49 | 82.49 |
| HORVU6Hr1G040960.1 | Barley | cytosol | 42.45 | 80.83 |
| VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 77.9 | 79.11 |
| KRH03516 | Soybean | mitochondrion | 76.37 | 78.08 |
| KRH56886 | Soybean | endoplasmic reticulum | 75.93 | 77.63 |
| PGSC0003DMT400073000 | Potato | cytosol | 40.48 | 76.76 |
| PGSC0003DMT400063414 | Potato | plastid | 73.96 | 75.11 |
| PGSC0003DMT400041333 | Potato | plastid | 74.62 | 75.11 |
| Solyc03g115740.1.1 | Tomato | plastid | 73.52 | 74.67 |
| Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 66.74 | 68.23 |
| GSMUA_Achr10P... | Banana | cytosol | 63.9 | 67.28 |
| AT1G18690.4 | Thale cress | golgi, plastid | 74.62 | 66.47 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 63.9 | 65.62 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 63.9 | 65.62 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 63.9 | 65.62 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 63.46 | 65.46 |
| GSMUA_Achr3P22760_001 | Banana | cytosol | 65.21 | 64.92 |
| TraesCS6D01G181200.1 | Wheat | plastid | 67.4 | 64.44 |
| Os02t0529600-01 | Rice | golgi, peroxisome, plastid | 67.61 | 64.38 |
| TraesCS6A01G196600.1 | Wheat | plastid | 67.18 | 64.23 |
| TraesCS6B01G221000.1 | Wheat | plastid | 67.18 | 64.23 |
| Zm00001d016687_P001 | Maize | plasma membrane | 67.18 | 64.23 |
| EES06903 | Sorghum | plastid | 66.96 | 63.75 |
| Os12t0149300-01 | Rice | golgi | 62.58 | 61.37 |
| GSMUA_Achr10P... | Banana | plastid | 65.21 | 59.13 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 57.77 | 57.89 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 57.77 | 57.89 |
| EES16639 | Sorghum | golgi | 58.64 | 57.63 |
| GSMUA_Achr11P... | Banana | cytosol | 63.02 | 56.69 |
| AT4G02500.1 | Thale cress | mitochondrion | 54.7 | 54.23 |
| AT3G62720.1 | Thale cress | mitochondrion | 54.05 | 53.7 |
| AT4G38310.1 | Thale cress | nucleus | 11.6 | 44.17 |
| EES15672 | Sorghum | mitochondrion | 49.02 | 43.5 |
| Zm00001d023398_P001 | Maize | mitochondrion | 48.14 | 42.88 |
| Zm00001d043041_P001 | Maize | nucleus | 25.82 | 40.0 |
| AT4G37690.1 | Thale cress | golgi | 34.14 | 36.11 |
| AT2G22900.1 | Thale cress | plastid | 34.57 | 35.19 |
| Zm00001d023418_P001 | Maize | nucleus | 48.36 | 21.44 |
Protein Annotations
| MapMan:21.2.1.1.2 | Gene3D:3.90.550.10 | EntrezGene:830665 | ProteinID:AED91197.1 | EMBL:AJ245573 | EMBL:AK227750 |
| ArrayExpress:AT5G07720 | EnsemblPlantsGene:AT5G07720 | RefSeq:AT5G07720 | TAIR:AT5G07720 | RefSeq:AT5G07720-TAIR-G | EnsemblPlants:AT5G07720.1 |
| TAIR:AT5G07720.1 | Unigene:At.9097 | ProteinID:BAB11451.1 | EMBL:BT010365 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009969 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0016758 | GO:GO:0033843 | InterPro:Glyco_trans_34 |
| InterPro:IPR029044 | EMBL:KJ138699 | RefSeq:NP_196389.1 | InterPro:Nucleotide-diphossugar_trans | PFAM:PF05637 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF4 | UniProt:Q9LF80 |
| UniParc:UPI0000048AEF | SEG:seg | : | : | : | : |
Description
XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
Coordinates
chr5:+:2455593..2457316
Molecular Weight (calculated)
52370.1 Da
IEP (calculated)
7.821
GRAVY (calculated)
-0.371
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.