Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016687_P001 | golgi |
| Zm00001d023398_P001 | golgi |
| Zm00001d023399_P001 | golgi |
| Zm00001d023417_P001 | golgi |
| Zm00001d023418_P001 | golgi |
| Zm00001d043041_P001 | golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 99.12 | 99.12 |
| EES16639 | Sorghum | golgi | 92.11 | 90.32 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 67.32 | 68.99 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 66.67 | 68.62 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 66.67 | 68.31 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 66.67 | 68.31 |
| CDY49114 | Canola | peroxisome | 20.18 | 65.71 |
| Os12t0149300-01 | Rice | golgi | 67.11 | 65.67 |
| CDX96540 | Canola | cytosol | 31.8 | 65.32 |
| CDX73082 | Canola | cytosol | 31.8 | 65.32 |
| CDX85826 | Canola | cytosol | 31.58 | 64.57 |
| CDX68187 | Canola | cytosol | 31.58 | 64.57 |
| Bra008146.1-P | Field mustard | cytosol | 31.36 | 64.13 |
| Zm00001d016687_P001 | Maize | plasma membrane | 64.47 | 61.51 |
| PGSC0003DMT400073000 | Potato | cytosol | 32.02 | 60.58 |
| GSMUA_Achr10P... | Banana | cytosol | 56.36 | 59.22 |
| KRH03516 | Soybean | mitochondrion | 57.89 | 59.06 |
| KRH56886 | Soybean | endoplasmic reticulum | 57.68 | 58.84 |
| Bra015915.1-P | Field mustard | plastid | 58.55 | 58.55 |
| PGSC0003DMT400063414 | Potato | plastid | 57.46 | 58.22 |
| AT1G74380.1 | Thale cress | plastid | 58.33 | 58.21 |
| VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 57.24 | 58.0 |
| Bra003804.1-P | Field mustard | plastid | 57.89 | 57.77 |
| AT5G07720.1 | Thale cress | cytosol, plastid | 57.89 | 57.77 |
| GSMUA_Achr3P22760_001 | Banana | cytosol | 57.68 | 57.3 |
| Solyc03g115740.1.1 | Tomato | plastid | 56.36 | 57.11 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 56.8 | 57.05 |
| CDX69995 | Canola | cytosol | 56.58 | 56.7 |
| Bra009305.1-P | Field mustard | cytosol | 56.36 | 56.48 |
| PGSC0003DMT400041333 | Potato | plastid | 56.14 | 56.39 |
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 55.7 | 56.19 |
| Zm00001d026023_P001 | Maize | endoplasmic reticulum, golgi | 32.24 | 55.47 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 56.8 | 53.73 |
| GSMUA_Achr10P... | Banana | plastid | 57.89 | 52.38 |
| Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 50.88 | 51.9 |
| GSMUA_Achr11P... | Banana | cytosol | 57.68 | 51.77 |
| Zm00001d025851_P001 | Maize | cytosol | 41.01 | 51.66 |
| Zm00001d051264_P001 | Maize | mitochondrion, plastid | 44.96 | 51.64 |
| Bra025677.1-P | Field mustard | golgi, mitochondrion, plasma membrane, plastid | 56.14 | 50.89 |
| Zm00001d047647_P001 | Maize | mitochondrion | 41.01 | 50.4 |
| Zm00001d028811_P001 | Maize | plasma membrane | 48.9 | 49.89 |
| Zm00001d047694_P001 | Maize | golgi | 48.9 | 49.78 |
| Zm00001d035801_P001 | Maize | mitochondrion, nucleus, plastid | 21.05 | 49.74 |
| AT1G18690.4 | Thale cress | golgi, plastid | 55.92 | 49.71 |
| Zm00001d039763_P001 | Maize | golgi, mitochondrion | 46.93 | 47.66 |
| Zm00001d023398_P001 | Maize | mitochondrion | 53.51 | 47.56 |
| Zm00001d043041_P001 | Maize | nucleus | 30.26 | 46.78 |
| Zm00001d028874_P001 | Maize | golgi | 40.79 | 40.88 |
| Zm00001d051681_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 35.96 | 36.94 |
| Zm00001d047648_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 21.93 | 36.1 |
| Zm00001d052625_P001 | Maize | plastid | 34.43 | 35.6 |
| Zm00001d047657_P001 | Maize | mitochondrion | 13.82 | 35.39 |
| Zm00001d052627_P001 | Maize | plastid | 35.09 | 34.93 |
| Zm00001d047654_P001 | Maize | golgi, plasma membrane | 16.01 | 34.93 |
| Zm00001d052628_P001 | Maize | plasma membrane | 35.75 | 34.03 |
| Zm00001d023418_P001 | Maize | nucleus | 52.63 | 23.28 |
Protein Annotations
| EntrezGene:103640759 | MapMan:21.2.1.1.2 | Gene3D:3.90.550.10 | ProteinID:AQK39284.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 |
| InterPro:IPR029044 | UniProt:K7TWY3 | InterPro:Nucleotide-diphossugar_trans | PFAM:PF05637 | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF8 |
| TMHMM:TMhelix | UniParc:UPI0002214CC0 | EnsemblPlantsGene:Zm00001d023417 | EnsemblPlants:Zm00001d023417_P001 | EnsemblPlants:Zm00001d023417_T001 | SEG:seg |
Description
Probable xyloglucan 6-xylosyltransferase 5
Coordinates
chr10:+:5085688..5087058
Molecular Weight (calculated)
51098.1 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.258
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAAGGGVR LRASSAKKQR QRTLNNIKIT LLCGFITVLV LRGTAGFNLL VSSGDLDGAA ADAKVVEDVE RILAEIRSDS EADDVVVVVE GGSSSSSSPR
101: NATAASFGNF SASATLVKVR EYSLGPPVRG WDAQRRDWMA QHPEFPRLHP RGRPRVLLVT GSPPGPCDNP AGDHYLLKAT KNKIDYCRLH GIDVVHNMAH
201: LDPELTGYWS KLPLVRRLML AHPEVEWIWW VDSDAIFTDM AFELPLSRYD GSNLVIHGYP DLLFEKRSWI SLNAGIFLLR NCQWSLDLLD AWVPMGPRGP
301: SRVEAGKLLT ASLTGRPPFD ADDQSALIHL LLVQKERWMD KVHVETEFYL HGFWTGLVDR YEQMMEDNHP GLGDDRWPFI THFVGCKTCG RYEDYPLDRC
401: IRGMERAFNF ADNQVLRLYG FRHRSLTTAK VRRVTDPATN PLEAKEAALN MDAKFT
101: NATAASFGNF SASATLVKVR EYSLGPPVRG WDAQRRDWMA QHPEFPRLHP RGRPRVLLVT GSPPGPCDNP AGDHYLLKAT KNKIDYCRLH GIDVVHNMAH
201: LDPELTGYWS KLPLVRRLML AHPEVEWIWW VDSDAIFTDM AFELPLSRYD GSNLVIHGYP DLLFEKRSWI SLNAGIFLLR NCQWSLDLLD AWVPMGPRGP
301: SRVEAGKLLT ASLTGRPPFD ADDQSALIHL LLVQKERWMD KVHVETEFYL HGFWTGLVDR YEQMMEDNHP GLGDDRWPFI THFVGCKTCG RYEDYPLDRC
401: IRGMERAFNF ADNQVLRLYG FRHRSLTTAK VRRVTDPATN PLEAKEAALN MDAKFT
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
Arabidopsis Description
XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.