Factsheet for Zm00001d047654_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

mitochondrion 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047657_P001	Maize	mitochondrion	71.77	84.27
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	63.16	47.65
Zm00001d028874_P001	Maize	golgi	70.81	32.53
EER92377	Sorghum	golgi	68.9	32.29
TraesCS4B01G184600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	55.02	25.73
TraesCS4A01G120100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	54.07	25.68
TraesCS4D01G185900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	54.55	25.5
HORVU4Hr1G054120.3	Barley	golgi, plasma membrane	56.46	25.49
TraesCS7D01G441500.1	Wheat	golgi	51.67	25.29
TraesCS7A01G452400.1	Wheat	golgi	52.63	25.29
Zm00001d047647_P001	Maize	mitochondrion	44.5	25.07
TraesCS7B01G352300.1	Wheat	golgi	51.67	24.88
HORVU7Hr1G102070.1	Barley	golgi	51.2	24.04
Os03t0305800-02	Rice	golgi	50.24	21.74
Zm00001d039763_P001	Maize	golgi, mitochondrion	45.93	21.38
Zm00001d043041_P001	Maize	nucleus	28.23	20.0
Zm00001d051264_P001	Maize	mitochondrion, plastid	33.01	17.38
Zm00001d028811_P001	Maize	plasma membrane	36.84	17.23
Zm00001d047694_P001	Maize	golgi	36.84	17.19
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	15.31	16.58
Zm00001d023399_P001	Maize	golgi, mitochondrion	34.93	16.01
Zm00001d023417_P001	Maize	golgi, mitochondrion	34.93	16.01
Zm00001d016687_P001	Maize	plasma membrane	33.49	14.64
Zm00001d025851_P001	Maize	cytosol	25.36	14.64
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	16.75	13.21
Zm00001d052625_P001	Maize	plastid	27.75	13.15
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	27.27	12.84
Zm00001d052627_P001	Maize	plastid	27.75	12.66
Zm00001d023398_P001	Maize	mitochondrion	30.14	12.28
Zm00001d052628_P001	Maize	plasma membrane	27.27	11.9
Zm00001d023418_P001	Maize	nucleus	31.58	6.4

Protein Annotations

EnsemblPlants:Zm00001d047654_P001	EnsemblPlants:Zm00001d047654_T001	EnsemblPlantsGene:Zm00001d047654	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF7	PFAM:PF05637	ProteinID:AQL07196.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000844D92F	UniProt:A0A1D6PC42	MapMan:35.1	:

Description

Xyloglucan 6-xylosyltransferase 2

Coordinates

chr9:+:138160446..138161185

Molecular Weight (calculated)

24425.7 Da

IEP (calculated)

8.319

GRAVY (calculated)

-0.100

Length

209 amino acids

Sequence
(BLAST)

001: MTERPVAADR RARQHRLLPI LVFPAFFLFI VALCALFLFR TSTTSLTAAM LYPSHLEMSH RQHSQCHYHR RHHCCQHHRL RVQWLHDNPR FPTFVAPGRP
101: RVLVVIGSSP RQCSDPNGKH LLLQAFKNKA DYCRVHDFDI FYNTVVLDAE LSGFWSKLPL LRTLMLVHSE TELLCWVDSD VIFIDMLFEP PWDKYAGHNL
201: VLPDSEEKV

Best Arabidopsis Sequence Match ( AT3G62720.1 )
(BLAST)

001: MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT

Arabidopsis Description

XXT1XXT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VEJ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.