Factsheet for TraesCS4D01G185900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, peroxisome

Predictor Summary:

golgi 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, peroxisome
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion, peroxisome
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G120100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	96.42	97.95
TraesCS4B01G184600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	97.54	97.54
HORVU4Hr1G054120.3	Barley	golgi, plasma membrane	94.18	90.93
TraesCS7D01G441500.1	Wheat	golgi	79.87	83.61
Zm00001d047647_P001	Maize	mitochondrion	63.53	76.55
EER92376	Sorghum	golgi	72.48	72.65
EER92377	Sorghum	golgi	65.77	65.92
Os03t0305800-02	Rice	golgi	70.92	65.63
Zm00001d028874_P001	Maize	golgi	66.44	65.27
TraesCS4D01G185800.1	Wheat	mitochondrion	62.42	60.52
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	35.57	57.4
Zm00001d047654_P001	Maize	golgi, plasma membrane	25.5	54.55
Zm00001d047657_P001	Maize	mitochondrion	21.7	54.49
TraesCS4D01G189500.1	Wheat	golgi, mitochondrion	47.2	46.78
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	41.83	42.02
TraesCS6D01G181200.1	Wheat	plastid	43.4	40.59
TraesCS6D01G266700.1	Wheat	plastid	35.12	34.13

Protein Annotations

EnsemblPlants:TraesCS4D01G185900.1	EnsemblPlantsGene:TraesCS4D01G185900	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF7	PFAM:PF05637	SEG:seg	TMHMM:TMhelix
MapMan:21.2.1.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:323603019..323604362

Molecular Weight (calculated)

50251.0 Da

IEP (calculated)

7.592

GRAVY (calculated)

-0.292

Length

447 amino acids

Sequence
(BLAST)

001: MPLPSSAMAE EHAGGQHDQQ VSAERRARQK LLFAVPIIPI VMFIVAPCAL FLFTADLALP RIRIEYARRD GDRDAPASAL ATAVAAVPSE EQQQLPPLRQ
101: LTDRPYSLGP NVSDYDARRA AWLAAHPRFP ALVAPGRPRV LVVTGSSPRR CKDPEGDHVL LRAFKNKADY CRVHGFDIFY SNAVLDAEMN GFWTKLPLLR
201: ALMVAHPEVE LLWWVDSDVV FTDMLFEPPW GKYARHNLLL HGWDDVVYGA KNWLGTNAGS FVIRNCQWSL DLLDAWARMG PRGPVRDRYG KVFAEALSNR
301: GAYEADDQSA LVYLLVTERG RWGGKVFLES SYLLHGFWEG IVDRYEEMRS KGRPGLGDNR WPLVTHFVGC KPCGEQSASY GAVRCRQGME RALNFADDQI
401: LGLYGFQHES LNTTAVRRVR NDTGRPLDAD DEQIGRLLHP EFRAAKP

Best Arabidopsis Sequence Match ( AT1G18690.1 )
(BLAST)

001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP

Arabidopsis Description

XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.