CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 3
golgi 3
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
PTS1:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028874_P001	Maize	golgi	91.03	89.23
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	48.43	77.98
EER92376	Sorghum	golgi	70.85	70.85
Zm00001d047657_P001	Maize	mitochondrion	27.58	69.1
Zm00001d047654_P001	Maize	golgi, plasma membrane	32.29	68.9
TraesCS4A01G120100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	65.47	66.36
TraesCS4B01G184600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	66.14	66.0
TraesCS4D01G185900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	65.92	65.77
TraesCS7D01G441500.1	Wheat	golgi	62.33	65.11
TraesCS7A01G452400.1	Wheat	golgi	63.23	64.83
HORVU4Hr1G054120.3	Barley	golgi, plasma membrane	66.59	64.15
HORVU7Hr1G102070.1	Barley	golgi	63.68	63.82
TraesCS7B01G352300.1	Wheat	golgi	61.88	63.59
Os03t0305800-02	Rice	golgi	65.25	60.25
EES00270	Sorghum	golgi, mitochondrion	59.19	58.28
EER92398	Sorghum	golgi	45.07	45.07
EES06903	Sorghum	plastid	42.83	39.79
EES16639	Sorghum	golgi	41.26	39.57
EES08636	Sorghum	plastid	36.55	36.3
EES15672	Sorghum	mitochondrion	40.36	34.95
EES07343	Sorghum	golgi	33.63	33.86
OQU83607	Sorghum	plastid	34.53	33.41
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	34.98	32.57

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	EntrezGene:8083994	UniProt:C5WMH8	EnsemblPlants:EER92377	ProteinID:EER92377
ProteinID:EER92377.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009969	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	GO:GO:0033843	GO:GO:0035252	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF7	EnsemblPlantsGene:SORBI_3001G396700
TMHMM:TMhelix	UniParc:UPI0001A82B27	RefSeq:XP_002465379.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:68229194..68230534

Molecular Weight (calculated)

50652.4 Da

IEP (calculated)

6.601

GRAVY (calculated)

-0.419

Length

446 amino acids

Sequence
(BLAST)

001: MTTEQPVTAD RRARQHRLLP LLVLPVFFLV APCALFFFRS SDLALIPRIR IEFDRPPKNE PPPAEPVPLT SPPPPPPPAP GANDDEEQRR LPPPRQLTDP
101: PYSLGPTADY DARRAQWLRD NPRFPAFVAP GRPRVLVVTG SSPRRCSDPD GEHLLLRAFK NKADYCRVHG FDIFYSTAVL DAELPGFWSK LPLLRTLMLA
201: HPEAELLWWV DSDVIFTDML FEPPWDKYAG HNLVLPGSEE KVYTAKSWIG INAGSFIIRN CQWSLDLLDA LARMGPRGPV REMYGRVIAG TLSDRQPYEA
301: CDQSALVYLL VTERRRWGDK TFLESSYCLS GFWVYIVDKL EEMRRRDSTT TPPEPGHERW PLTTHFMGCK PCGGDDSTYD AAWCRRSMER ALNFGDDQIL
401: NLYGFEHKTL NTTAVRRVRN DTGGPLDAAD EELGRLLHPT FRAANL

Best Arabidopsis Sequence Match ( AT1G18690.1 )
(BLAST)

001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP

Arabidopsis Description

XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.