CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052627_P001	Maize	plastid	85.47	86.03
EES08636	Sorghum	plastid	68.98	70.82
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	63.34	60.96
Os11t0546500-00	Rice	golgi, peroxisome, plastid	62.47	59.63
TraesCSU01G194500.1	Wheat	golgi	59.0	59.39
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	60.3	58.65
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	60.3	58.04
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	59.22	57.59
TraesCS6B01G078800.1	Wheat	plastid	59.0	57.51
EES07343	Sorghum	golgi	54.45	56.66
PGSC0003DMT400023470	Potato	endoplasmic reticulum	30.59	52.22
GSMUA_Achr3P30030_001	Banana	golgi	44.9	52.14
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	47.29	49.1
AT4G38310.1	Thale cress	nucleus	12.58	48.33
Solyc03g043920.2.1	Tomato	golgi	41.87	46.62
Bra017847.1-P	Field mustard	golgi	42.73	44.98
PGSC0003DMT400055223	Potato	golgi	42.73	44.77
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	43.6	44.77
CDY29577	Canola	golgi	42.52	44.75
CDX72649	Canola	golgi	42.52	44.75
KRH28334	Soybean	plastid	43.6	44.47
AT4G37690.1	Thale cress	golgi	41.21	43.98
AT2G22900.1	Thale cress	plastid	41.87	42.98
CDY49440	Canola	golgi	41.43	42.63
CDX76887	Canola	golgi, plastid	41.43	42.63
Bra039938.1-P	Field mustard	golgi, plastid	41.43	42.63
VIT_00s0322g00030.t01	Wine grape	mitochondrion	31.02	41.69
EER92376	Sorghum	golgi	36.66	37.89
EER92398	Sorghum	golgi	33.84	34.98
EES00270	Sorghum	golgi, mitochondrion	34.27	34.88
EER92377	Sorghum	golgi	33.41	34.53
EES16639	Sorghum	golgi	34.06	33.76
EES06903	Sorghum	plastid	31.89	30.62
EES15672	Sorghum	mitochondrion	29.72	26.6

Protein Annotations

EnsemblPlants:OQU83607	EnsemblPlantsGene:SORBI_3005G144101	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF10	PFAM:PF05637	ProteinID:OQU83607	ProteinID:OQU83607.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B8BA151	UniProt:A0A1Z5RIW6	MapMan:21.2.3.1.3	:

Description

hypothetical protein

Coordinates

chr5:+:60853399..60854796

Molecular Weight (calculated)

50867.6 Da

IEP (calculated)

9.679

GRAVY (calculated)

-0.312

Length

461 amino acids

Sequence
(BLAST)

001: MAAASEAASL RVSASAGSSK HHGTQGPAAG HGRGRRARDA LVFAAGVAAA LLALVGTSSV LHPGGRGGLL VSLPVPVPGP DDGPRTFYDD PELSYAVAAP
101: GRRLTGWDAK RAQWLRSRGR RNAPERVVMV SGSQPEPCPG AAGDHLLLRF LKNKLDYCRL HGIELLYNRE FLHPAMTGYW AKIPIVRAAM VAHPEAEWVW
201: WVDSDAVFTD MDFSLPLAKY AGRNLVVYGW PHKFFVRKSW LGLNAGVFLI RNCQWSLDFM DEWASMGPAY PEEHARWGKT FREALGDKDS DVADDQSALV
301: YLLLNGWERL GKKTFVETEY FFQGYWKEVV DRLDGVAARY EAVERRACTP GGMGMGLRRR HAEREHLRYA AARNAAVSGV VPGPAGGGVE GWRRPLITHF
401: PCSGGRNPMY SRESCDNGMR RALAFADDQV LRAYGFRHAA PLNDTVRALP FDYPAARARK H

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.