Factsheet for PGSC0003DMT400055223

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 2
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023470	Potato	endoplasmic reticulum	45.91	74.81
AT4G38310.1	Thale cress	nucleus	19.55	71.67
VIT_00s0322g00030.t01	Wine grape	mitochondrion	50.23	64.43
Bra039938.1-P	Field mustard	golgi, plastid	62.05	60.94
CDX76887	Canola	golgi, plastid	62.05	60.94
CDY49440	Canola	golgi	62.05	60.94
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	62.05	60.8
KRH28334	Soybean	plastid	62.05	60.4
AT2G22900.1	Thale cress	plastid	61.59	60.36
Bra017847.1-P	Field mustard	golgi	58.86	59.13
CDY29577	Canola	golgi	58.86	59.13
AT4G37690.1	Thale cress	golgi	57.95	59.03
CDX72649	Canola	golgi	58.41	58.68
PGSC0003DMT400085728	Potato	golgi, mitochondrion	57.73	57.34
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	55.45	54.95
GSMUA_Achr3P30030_001	Banana	golgi	49.09	54.41
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	50.23	52.12
EES07343	Sorghum	golgi	52.27	51.92
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	52.27	51.8
HORVU6Hr1G071920.1	Barley	golgi	50.23	51.76
Os02t0723200-01	Rice	mitochondrion	50.23	49.44
TraesCS6D01G266700.1	Wheat	plastid	49.55	47.39
Zm00001d052625_P001	Maize	plastid	47.27	47.17
EES08636	Sorghum	plastid	47.27	46.33
Os11t0546500-00	Rice	golgi, peroxisome, plastid	50.45	45.96
TraesCSU01G194500.1	Wheat	golgi	47.5	45.63
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	48.18	44.26
TraesCS6B01G078800.1	Wheat	plastid	47.5	44.19
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	44.55	44.04
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	47.27	43.88
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	47.73	43.84
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	47.05	43.67
Zm00001d052627_P001	Maize	plastid	45.45	43.67
Zm00001d052628_P001	Maize	plasma membrane	47.27	43.42
OQU83607	Sorghum	plastid	44.77	42.73
PGSC0003DMT400073000	Potato	cytosol	22.73	41.49
PGSC0003DMT400063414	Potato	plastid	37.05	36.22
PGSC0003DMT400041333	Potato	plastid	37.27	36.12
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	19.55	34.82
PGSC0003DMT400058812	Potato	mitochondrion	34.32	32.54

Protein Annotations

EnsemblPlants:PGSC0003DMT400055223	EnsemblPlantsGene:PGSC0003DMG400021437	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	PFAM:PF05637	PGSC:PGSC0003DMG400021437	SEG:seg
TMHMM:TMhelix	UniParc:UPI000295D3F3	UniProt:M1BXL0	MapMan:21.2.3.1.3	:	:

Description

Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021437]

Coordinates

chr2:-:42636276..42638238

Molecular Weight (calculated)

51326.8 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.446

Length

440 amino acids

Sequence
(BLAST)

001: MAKQNCRSKI SSIFSDGFLF AGASIVALLV VWAFWSFMST SPNADPSFLI TSADQNSALK TPVDPVSLGF NLRYDPPDPT FYDHPDLSYT MEKPIKNWDE
101: KRRQWLNLHP SFIPGAEERI LMVSGSQSTP CKNPIGDHLL LRFFKNKVDY CRIHGYDIFY NNILLQPKMW SFWAKMPAIK AAMIAHPETE WIWWVDSDAA
201: FTDMDFKLPL DRYKDHNFVV HGWEKLLYEQ QSWTSINAGV FLIRNCQWSM DLMEAWAKMG PQSPEYDKWG EILRTTFKDK IFQESDDQSG LAYLLLKEKE
301: KWGNKIYVEG GYYFEGYWVE IVGTYDNITD RYLAIEKSEA RLRRRHAERV SESYASVWEE HLKEAGYGRY SWRRPFITHF TGCQPCSGDH NQMYSGETCF
401: DAMQKALNFA DNQVLRKYGY MHKDLLDSSS VFPVPFNFPA

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.