Factsheet for PGSC0003DMT400085728

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 3
plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g092210.1.1	Tomato	golgi, mitochondrion	95.49	95.49
PGSC0003DMT400023470	Potato	endoplasmic reticulum	35.67	58.52
PGSC0003DMT400055223	Potato	golgi	57.34	57.73
KRH58138	Soybean	golgi	51.47	53.27
PGSC0003DMT400073000	Potato	cytosol	24.83	45.64
PGSC0003DMT400063414	Potato	plastid	37.7	37.11
PGSC0003DMT400041333	Potato	plastid	37.02	36.12
PGSC0003DMT400058812	Potato	mitochondrion	32.96	31.47

Protein Annotations

MapMan:21.2.3.1.3	Gene3D:3.90.550.10	EMBL:AJ864708	ProteinID:CAI11452	ProteinID:CAI11452.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_34	InterPro:IPR029044	UniProt:M1DA54	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	EnsemblPlantsGene:PGSC0003DMG400035299
PGSC:PGSC0003DMG400035299	EnsemblPlants:PGSC0003DMT400085728	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	TMHMM:TMhelix	UniParc:UPI00029595D5
SEG:seg	:	:	:	:	:

Description

Alpha-6-galactosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400035299]

Coordinates

chr2:+:42627409..42628740

Molecular Weight (calculated)

51172.7 Da

IEP (calculated)

7.820

GRAVY (calculated)

-0.457

Length

443 amino acids

Sequence
(BLAST)

001: MAHNVFRAKQ QSSSPRDKSL FAAAIVAVLL VCAIWSFTDP LPNLSGLLYS QSISSPDYCP PGREAVDRSS DPPEKTFYDE PELSYTINKP IKNWDEKRVQ
101: WLKLHPSFAA GRVNRVLLLS GSQPTPCKNP RGDHLLLRFF KNKVDYCRIH GYDIFYGNTF FHPKMRSYWA KIPLVRAAML AHPESEWILW IDSDAIFTDM
201: DFKIPLHKYN DYNFIVHGWP DLIFKKKSWV AINAGIFLIR NCQWSMDFLD VWANMGPKSP EYKQWGKILR TTFKDKTFPE SDDQSALSYL ILKGERKWRS
301: KIHAITDYSL HGYWLGIVNR FDKITENYTK IERDVPKLRR RHAEAVSDSY AEAREPLLAE GEDGKGGWRR PFITHFTGCQ PCSGDHAAEY VGDSCWVGME
401: RALNFADNQV LRNFGFMHDD IKSNSPVSPL NFDFPAEDSE EFV

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.