CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 5
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	65.89	62.81
KRH28334	Soybean	plastid	66.12	62.61
PGSC0003DMT400085728	Potato	golgi, mitochondrion	53.27	51.47
Solyc02g092210.1.1	Tomato	golgi, mitochondrion	53.04	51.24
KRH03516	Soybean	mitochondrion	38.32	36.69
KRH56886	Soybean	endoplasmic reticulum	38.08	36.47
KRH37112	Soybean	golgi, mitochondrion	35.75	34.0
KRG96428	Soybean	mitochondrion	35.75	33.63
KRH12052	Soybean	mitochondrion	20.56	32.96
KRH68171	Soybean	golgi, mitochondrion	15.89	28.22

Protein Annotations

EntrezGene:100782286	MapMan:21.2.3.1.3	Gene3D:3.90.550.10	EMBL:ACUP02003204	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G106900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0010192	GO:GO:0010392	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0051070	InterPro:Glyco_trans_34	UniProt:I1K2F3
InterPro:IPR029044	EnsemblPlants:KRH58138	ProteinID:KRH58138	ProteinID:KRH58138.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637
PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	TMHMM:TMhelix	UniParc:UPI0002339B68	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:28424506..28425792

Molecular Weight (calculated)

50103.4 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.484

Length

428 amino acids

Sequence
(BLAST)

001: MAKFSSRKKS SIWVPNGCIF FLGGALTTLL LLWGLSSFII PIPNSDPELN PVSTKLSSLQ FPTNTDSPET TFYDDPETSY TMDKPMHNWD EKRKQWLLHH
101: PSFTVTTHDS KILVVTGSQP KRCHNPIGDH LLLRFFKNKV DYCRLHNYDI IYNNALLHPK MGSYWAKYPV IRAAMVAHPE AEWVWWVDSD AVFTDMEFTL
201: PLNRYKDHNL VVHGWENLVR ENRSWTGLNA GVFLMRNCQW SLDFMDVWAS MGPMSPEYEK WGETLKSTFK DKVLPDSDDQ TALAYLIAVE NKWADKIFLE
301: SEYYFQGYWL EISKTYYNVS ERYDEVERKV KGLRRRHAEK VSESYGLMRE EYLNDVGEWK RPFITHFTGC QPCNGHHNPA YDAMDCWNSM ERALNFADNQ
401: VLRVYGYMRK DLLNKAISPI PFDYPNVV

Best Arabidopsis Sequence Match ( AT4G37690.1 )
(BLAST)

001: MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW

Arabidopsis Description

GT6Glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG1]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.