CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, nucleus

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
golgi 1
peroxisome 2
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28334	Soybean	plastid	91.98	91.37
PGSC0003DMT400023470	Potato	endoplasmic reticulum	40.53	67.41
KRH58138	Soybean	golgi	62.81	65.89
AT4G38310.1	Thale cress	nucleus	16.93	63.33
VIT_00s0322g00030.t01	Wine grape	mitochondrion	48.33	63.27
Solyc03g043920.2.1	Tomato	golgi	57.24	62.08
PGSC0003DMT400055223	Potato	golgi	60.8	62.05
AT2G22900.1	Thale cress	plastid	59.47	59.47
AT4G37690.1	Thale cress	golgi	56.12	58.33
CDY49440	Canola	golgi	58.13	58.26
Bra039938.1-P	Field mustard	golgi, plastid	58.13	58.26
CDX76887	Canola	golgi, plastid	58.13	58.26
Bra017847.1-P	Field mustard	golgi	55.68	57.08
CDY29577	Canola	golgi	55.68	57.08
CDX72649	Canola	golgi	55.01	56.39
HORVU6Hr1G071920.1	Barley	golgi	52.12	54.8
GSMUA_Achr3P30030_001	Banana	golgi	48.11	54.41
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	50.56	53.54
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	52.56	53.15
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	51.67	52.25
EES07343	Sorghum	golgi	51.45	52.14
Os02t0723200-01	Rice	mitochondrion	51.45	51.68
TraesCS6D01G266700.1	Wheat	plastid	50.78	49.57
Zm00001d052625_P001	Maize	plastid	47.44	48.3
EES08636	Sorghum	plastid	47.44	47.44
TraesCSU01G194500.1	Wheat	golgi	47.66	46.72
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	47.88	45.36
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	44.77	45.17
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	47.88	44.89
TraesCS6B01G078800.1	Wheat	plastid	47.22	44.82
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	46.99	44.51
Zm00001d052628_P001	Maize	plasma membrane	46.99	44.05
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	46.77	43.84
OQU83607	Sorghum	plastid	44.77	43.6
Os11t0546500-00	Rice	golgi, peroxisome, plastid	46.77	43.48
Zm00001d052627_P001	Maize	plastid	43.88	43.01
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	21.38	38.87
KRH03516	Soybean	mitochondrion	36.3	36.47
KRH56886	Soybean	endoplasmic reticulum	35.86	36.02
KRG96428	Soybean	mitochondrion	34.97	34.51
KRH37112	Soybean	golgi, mitochondrion	34.52	34.44
KRH12052	Soybean	mitochondrion	19.82	33.33
KRH68171	Soybean	golgi, mitochondrion	16.26	30.29

Protein Annotations

EntrezGene:100778769	MapMan:21.2.3.1.3	Gene3D:3.90.550.10	EMBL:ACUP02000658	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G195000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0010192	GO:GO:0010392	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0051070	InterPro:Glyco_trans_34	UniProt:I1J9F9
InterPro:IPR029044	EnsemblPlants:KRH77153	ProteinID:KRH77153	ProteinID:KRH77153.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637
PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	TMHMM:TMhelix	UniParc:UPI00023371D8	:	:

Description

hypothetical protein

Coordinates

chr1:+:52920636..52923799

Molecular Weight (calculated)

52596.1 Da

IEP (calculated)

7.288

GRAVY (calculated)

-0.648

Length

449 amino acids

Sequence
(BLAST)

001: MVKSELSNHY HNNNKSPMMM AKPHRNKSSS LFLSDGCLFL GGAFSALILV WGFSSFTTTI PNDTPNFESL SKNDAASHHI APDFNFDPPD RTFYDDPQMG
101: YTMDKKVRNW DEKREEWLKL HPSFAAGARE RVFMVTGSQP KPCRNPTGDH LLLRFFKNKV DYCRLHGCDI FYNNALLEPK MFAYWAKYPA VRAAMVAHPE
201: AEWIWWVDSD ALFTDMEFKL PLERYREHNL VVHGWAHLIH EKRSWTGLNA GVFLIRNCQW SLDFMEAWAS MGPQSPNYEK WGQTLRSTFK DKFFPESDDQ
301: TGLAYLIAME KDKWAERIYL ESEYYFEGYW EEIQGTFKNI TEKYKEMEKG VQRLRRRHAE KVSETYGEMR EEYLKDAGNA KGSWRRPFIT HFTGCQPCSG
401: KYNAMYSAHD CWNAMHNALN FADNQVMRKF GYSLLDNAVS PLPFDYPRH

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.