Factsheet for GSMUA_Achr1P12580_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole

Predictor Summary:

nucleus 1
golgi 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G38310.1	Thale cress	nucleus	15.06	55.83
GSMUA_Achr3P30030_001	Banana	golgi	48.31	54.16
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	50.34	50.45
PGSC0003DMT400023470	Potato	endoplasmic reticulum	29.66	48.89
Solyc03g043920.2.1	Tomato	golgi	44.49	47.83
KRH28334	Soybean	plastid	46.52	45.8
Bra017847.1-P	Field mustard	golgi	44.94	45.66
CDX72649	Canola	golgi	44.72	45.43
CDY29577	Canola	golgi	44.72	45.43
CDY49440	Canola	golgi	45.62	45.31
Bra039938.1-P	Field mustard	golgi, plastid	45.62	45.31
AT4G37690.1	Thale cress	golgi	43.82	45.14
CDX76887	Canola	golgi, plastid	45.39	45.09
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	45.17	44.77
PGSC0003DMT400055223	Potato	golgi	44.04	44.55
AT2G22900.1	Thale cress	plastid	44.04	43.65
VIT_00s0322g00030.t01	Wine grape	mitochondrion	32.36	41.98
GSMUA_Achr1P24760_001	Banana	mitochondrion	36.18	37.27
GSMUA_Achr8P22410_001	Banana	golgi, mitochondrion	35.51	36.83
GSMUA_Achr10P...	Banana	cytosol	35.28	36.18
GSMUA_Achr3P22760_001	Banana	cytosol	36.18	35.08
GSMUA_Achr10P...	Banana	plastid	36.4	32.14
GSMUA_Achr11P...	Banana	cytosol	35.73	31.3

Protein Annotations

EnsemblPlants:GSMUA_Achr1P12580_001	EnsemblPlants:GSMUA_Achr1T12580_001	EnsemblPlantsGene:GSMUA_Achr1G12580_001	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	PFAM:PF05637	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002960944	UniProt:M0RZB6	MapMan:35.1	:	:

Description

Putative Galactomannan galactosyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G12580_001]

Coordinates

chr1:+:9673532..9674992

Molecular Weight (calculated)

50488.1 Da

IEP (calculated)

9.263

GRAVY (calculated)

-0.417

Length

445 amino acids

Sequence
(BLAST)

001: MQTEDETPPR KKSFLRSSVT LLVAERLLLF FFGAGVALLF SVSALSSSLC TVLPNPIPTP LPTIIHHRPP LAPSIPRRPL PVATTAPRPP LSTVSHRRDS
101: RKDPDRRRST RATFYDDPSL SYTIDRPITN WDSKRREWLR LNPSLATPDR VVMVTGSPPG RCPNPGGDHL LLRFYKNKAD YCRLHGYDLF YNTALLHPEM
201: PGCWAKIPLV RAAMVAHPES EWVWWVDQDA AFTDMEFRPP LHRYRAHHFV VPGWPYMVYT ARDWVGLNAG VFLLRNSQWG LDFLDAWASM GPQTPHHGKW
301: GRILDAEIRG KLTSFADDQS ALVHLLAKEQ RRWRDKVHLE SAYDLHGYWE PIVGRLEDVA AAYAEMERRD ARRSFVTHFT GCQPCGGDHN PAYTWQGCVD
401: GMARALNFAD DQVLRAYGFG HTNLNDSASI RSLPFGYPAS SRGGR

Best Arabidopsis Sequence Match ( AT4G37690.1 )
(BLAST)

001: MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW

Arabidopsis Description

GT6Glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG1]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.