Factsheet for GSMUA_Achr11P26120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...	golgi
GSMUA_Achr10P...	golgi
GSMUA_Achr11P...	golgi
GSMUA_Achr3P22760_001	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74380.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT1G74380.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT1G74380.1	GSMUA_Achr11P...	AT1G74380.1	22665445
AT1G74380.1	GSMUA_Achr3P22760_001	AT1G74380.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	77.17	90.32
GSMUA_Achr3P22760_001	Banana	cytosol	73.23	81.05
HORVU6Hr1G040960.1	Barley	cytosol	38.19	80.83
CDX96540	Canola	cytosol	34.06	77.93
CDX73082	Canola	cytosol	34.06	77.93
CDX85826	Canola	cytosol	33.66	76.68
CDX68187	Canola	cytosol	33.66	76.68
Bra008146.1-P	Field mustard	cytosol	33.46	76.23
CDY49114	Canola	peroxisome	20.67	75.0
PGSC0003DMT400073000	Potato	cytosol	33.86	71.37
GSMUA_Achr10P...	Banana	plastid	69.49	70.04
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	59.65	67.33
Zm00001d016687_P001	Maize	plasma membrane	62.99	66.95
Os02t0529600-01	Rice	golgi, peroxisome, plastid	62.99	66.67
EES06903	Sorghum	plastid	62.8	66.46
KRH03516	Soybean	mitochondrion	58.27	66.22
KRH56886	Soybean	endoplasmic reticulum	58.07	66.0
Bra015915.1-P	Field mustard	plastid	58.86	65.57
PGSC0003DMT400041333	Potato	plastid	58.46	65.42
TraesCS6A01G196600.1	Wheat	plastid	61.42	65.27
TraesCS6B01G221000.1	Wheat	plastid	61.42	65.27
TraesCS6D01G181200.1	Wheat	plastid	61.42	65.27
AT1G74380.1	Thale cress	plastid	58.27	64.77
PGSC0003DMT400063414	Potato	plastid	57.28	64.67
TraesCS5A01G129800.1	Wheat	mitochondrion	56.3	64.27
Bra003804.1-P	Field mustard	plastid	57.68	64.11
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	56.1	64.04
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	56.1	64.04
Solyc03g115740.1.1	Tomato	plastid	56.69	64.0
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	55.71	63.88
AT5G07720.1	Thale cress	cytosol, plastid	56.69	63.02
Bra009305.1-P	Field mustard	cytosol	55.71	62.2
CDX69995	Canola	cytosol	55.71	62.2
CDX99024	Canola	cytosol, golgi, peroxisome, plastid	55.51	62.11
Os12t0149300-01	Rice	golgi	56.69	61.8
CDY19235	Canola	cytosol, golgi, plasma membrane, plastid	54.72	61.5
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	51.97	59.06
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	55.71	58.71
Zm00001d023399_P001	Maize	golgi, mitochondrion	51.97	57.89
Zm00001d023417_P001	Maize	golgi, mitochondrion	51.77	57.68
GSMUA_Achr1P24760_001	Banana	mitochondrion	49.02	57.64
EES16639	Sorghum	golgi	52.76	57.63
GSMUA_Achr8P22410_001	Banana	golgi, mitochondrion	48.43	57.34
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	55.71	56.26
AT1G18690.4	Thale cress	golgi, plastid	54.53	54.0
EES15672	Sorghum	mitochondrion	44.69	44.08
Zm00001d023398_P001	Maize	mitochondrion	43.5	43.08
Zm00001d043041_P001	Maize	nucleus	25.0	43.05
GSMUA_Achr3P30030_001	Banana	golgi	32.48	41.56
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	33.66	38.51
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	31.3	35.73
Zm00001d023418_P001	Maize	nucleus	43.7	21.53

Protein Annotations

EnsemblPlants:GSMUA_Achr11P26120_001	EnsemblPlants:GSMUA_Achr11T26120_001	EnsemblPlantsGene:GSMUA_Achr11G26120_001	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF4	PFAM:PF05637	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002955DA3	UniProt:M0RVJ2	MapMan:21.2.1.1.2	:	:

Description

Putative glycosyltransferase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26120_001]

Coordinates

chr11:-:25002869..25005689

Molecular Weight (calculated)

56980.2 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.352

Length

508 amino acids

Sequence
(BLAST)

001: MSPTRNLPTV NLNPMGSRTW DIHNLPKKFS WICAGDRNYK YIPHAESFAL RQKASGDETE LGVPLPTARV AVMGQEAAGL KPTSARDRPD AATRSRLPRR
101: RQIRKTFNNL KITVFCGVVT ILVLRGTVGI GSLAGAGGDA AAADQKIPFG FNSTAASLNY TSAAVVAAAE NYTLGPRISD WDEQRRRWLG ENPGFPSRTP
201: GGKPRILLVT GSPPNPCDSS IGDHYLLKAT KNKIDYCRLH GIEIVYNMAH LDRELAGYWA KLPLIRRLML SHPEVEWIWW MDSDALFTDM AFEIPLDRYA
301: AHNLVVHGYP DLIFEKHSWI GLNTGSFLLR NCQWILDLLD AWAPMGPKGP IRDEAGKILT ANLKGRPAFE ADDQSALIYL LLSQQDKWGD KVYIENSYYL
401: HGYWAGLVDR YEEMMEKHHP GLGDERWPFV THFVGCKPCG SYGDYPVERC LSSMERAFNF ADNQVLRMYG FAHGSLASPN IRRTKKQTAK PLEFLDQLNL
501: KAGIETRG

Best Arabidopsis Sequence Match ( AT1G74380.1 )
(BLAST)

001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

Arabidopsis Description

XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.