Factsheet for GSMUA_Achr8P22410_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 1
mitochondrion 4
golgi 2
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...	golgi, golgi
GSMUA_Achr10P...	golgi, golgi
GSMUA_Achr11P...	golgi, golgi
GSMUA_Achr1P24760_001	golgi, golgi
GSMUA_Achr3P22760_001	golgi, golgi
GSMUA_Achr8P22410_001	golgi, golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62720.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT3G62720.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT3G62720.1	GSMUA_Achr11P...	AT1G74380.1	22665445
AT3G62720.1	GSMUA_Achr3P22760_001	AT1G74380.1	22665445
AT3G62720.1	GSMUA_Achr1P24760_001	AT4G02500.1	22665445
AT3G62720.1	GSMUA_Achr8P22410_001	AT4G02500.1	22665445
AT4G02500.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT4G02500.1	GSMUA_Achr10P...	AT1G74380.1	22665445
AT4G02500.1	GSMUA_Achr11P...	AT1G74380.1	22665445
AT4G02500.1	GSMUA_Achr3P22760_001	AT1G74380.1	22665445
AT4G02500.1	GSMUA_Achr1P24760_001	AT4G02500.1	22665445
AT4G02500.1	GSMUA_Achr8P22410_001	AT4G02500.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	53.85	87.17
Os03t0300000-01	Rice	cytosol	69.93	86.21
GSMUA_Achr1P24760_001	Banana	mitochondrion	84.15	83.56
Zm00001d025851_P001	Maize	cytosol	65.73	77.9
Zm00001d051264_P001	Maize	mitochondrion, plastid	70.63	76.32
CDY11443	Canola	cytosol	10.49	76.27
Zm00001d047694_P001	Maize	golgi	77.62	74.33
EER92398	Sorghum	golgi	77.16	74.22
Zm00001d028811_P001	Maize	plasma membrane	77.16	74.05
VIT_07s0005g00150.t01	Wine grape	mitochondrion	77.86	73.89
CDX90935	Canola	mitochondrion	77.16	73.72
CDY22055	Canola	mitochondrion	75.99	72.61
KRH37112	Soybean	golgi, mitochondrion	75.76	72.22
AT4G02500.1	Thale cress	mitochondrion	77.16	71.8
Bra036262.1-P	Field mustard	mitochondrion	77.16	71.64
Bra000877.1-P	Field mustard	mitochondrion	77.16	71.49
VIT_05s0020g01530.t01	Wine grape	mitochondrion	77.39	71.24
Bra018545.1-P	Field mustard	mitochondrion	76.69	71.21
HORVU4Hr1G054910.1	Barley	golgi, mitochondrion	74.83	71.02
TraesCS4D01G189500.1	Wheat	golgi, mitochondrion	74.59	70.95
TraesCS4B01G188100.1	Wheat	golgi, mitochondrion	74.59	70.95
TraesCS4A01G116100.2	Wheat	golgi, mitochondrion	74.59	70.8
CDY50378	Canola	cytosol	77.39	70.79
CDY18017	Canola	mitochondrion	55.01	70.45
KRG96428	Soybean	mitochondrion	74.36	70.11
CDX76657	Canola	mitochondrion	31.0	69.27
TraesCS1B01G115300.1	Wheat	golgi, mitochondrion	75.06	68.95
Bra007696.1-P	Field mustard	mitochondrion	72.96	68.64
AT3G62720.1	Thale cress	mitochondrion	72.96	68.04
CDX93965	Canola	mitochondrion	72.49	67.9
PGSC0003DMT400058812	Potato	mitochondrion	73.43	67.89
Bra014396.1-P	Field mustard	mitochondrion	72.26	67.54
CDY70418	Canola	golgi, mitochondrion	72.03	67.17
CDY70090	Canola	mitochondrion	54.08	65.54
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	27.74	61.66
CDX97271	Canola	mitochondrion	38.0	60.59
KRH12052	Soybean	mitochondrion	37.3	59.93
CDY65940	Canola	mitochondrion	35.43	57.14
GSMUA_Achr10P...	Banana	cytosol	57.34	56.68
CDY11442	Canola	cytosol, extracellular, mitochondrion, plastid	10.72	54.12
KRH68171	Soybean	golgi, mitochondrion	30.07	53.53
GSMUA_Achr3P22760_001	Banana	cytosol	56.88	53.16
GSMUA_Achr10P...	Banana	plastid	58.04	49.4
GSMUA_Achr11P...	Banana	cytosol	57.34	48.43
CDY11441	Canola	mitochondrion	20.51	46.56
Solyc01g067930.2.1	Tomato	mitochondrion	22.14	45.24
GSMUA_Achr3P30030_001	Banana	golgi	39.39	42.57
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	38.93	37.61
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	36.83	35.51

Protein Annotations

EnsemblPlants:GSMUA_Achr8P22410_001	EnsemblPlants:GSMUA_Achr8T22410_001	EnsemblPlantsGene:GSMUA_Achr8G22410_001	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF6	PFAM:PF05637	TMHMM:TMhelix
UniParc:UPI000294E1A0	UniProt:M0TSP4	MapMan:21.2.1.1.2	:	:	:

Description

Putative glycosyltransferase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G22410_001]

Coordinates

chr8:+:27012954..27014513

Molecular Weight (calculated)

49835.4 Da

IEP (calculated)

7.533

GRAVY (calculated)

-0.244

Length

429 amino acids

Sequence
(BLAST)

001: MSVLGRCLGE RRVRQLHRAL RNGRLTLLCL VMTIVVLRGT IGAEEEDPPR DPSKPYSLGP KISDWDEQRA DWLRRHPERP NFLGSTKPRV LLVTGSSPKP
101: CENPVGDHYL LKSIKNKIDY CRVHGIEIFY NLALLDAEMA GFWAKLPLIR SLLLAHPEVE FLWWMDSDAM FTDMAFELPW ERYAPFNLVL HGWNEMVYDD
201: RNWIGLNTGS FLLRNCQWSL DLLDVWAPMG PKGKTRTEAG KVLTAFLKDR PVFEADDQSA MVYLLVTQRD RWGDKVYLES AYYLHGYWGI LVDRYEEMIE
301: NYHPGLGDHR WPLVTHFVGC KPCGKFGDYP VERCLKQMDR AFNFGDNQIL QMYGFTHKSL ASRKVKRIRN ETSNPLELKD ELGLLHPAFK ATKFLTYEYA
401: SRIGIVIFFY SISFICCHLL ILDDPQIYL

Best Arabidopsis Sequence Match ( AT4G02500.1 )
(BLAST)

001: MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V

Arabidopsis Description

XXT2Xyloglucan 6-xylosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:O22775]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.