Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- golgi 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1B01G115300.1 | golgi, golgi |
| TraesCS4A01G116100.2 | golgi, golgi |
| TraesCS4B01G188100.1 | golgi, golgi |
| TraesCS4D01G189500.1 | golgi, golgi |
| TraesCS5A01G129800.1 | golgi, golgi |
| TraesCS5B01G128600.1 | golgi, golgi |
| TraesCS5D01G137300.1 | golgi, golgi |
| TraesCS6A01G196600.1 | golgi, golgi |
| TraesCS6B01G221000.1 | golgi, golgi |
| TraesCS6D01G181200.1 | golgi, golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G116100.2 | Wheat | golgi, mitochondrion | 99.33 | 99.11 |
| TraesCS4D01G189500.1 | Wheat | golgi, mitochondrion | 99.11 | 99.11 |
| HORVU4Hr1G054910.1 | Barley | golgi, mitochondrion | 97.34 | 97.12 |
| TraesCS1B01G115300.1 | Wheat | golgi, mitochondrion | 99.11 | 95.72 |
| Os03t0300000-01 | Rice | cytosol | 70.29 | 91.09 |
| Zm00001d026023_P001 | Maize | endoplasmic reticulum, golgi | 52.99 | 90.19 |
| EER92398 | Sorghum | golgi | 86.25 | 87.22 |
| Zm00001d025851_P001 | Maize | cytosol | 69.84 | 87.02 |
| Zm00001d047694_P001 | Maize | golgi | 86.25 | 86.83 |
| Zm00001d028811_P001 | Maize | plasma membrane | 86.03 | 86.8 |
| Zm00001d051264_P001 | Maize | mitochondrion, plastid | 74.94 | 85.14 |
| Zm00001d035801_P001 | Maize | mitochondrion, nucleus, plastid | 34.15 | 79.79 |
| GSMUA_Achr1P24760_001 | Banana | mitochondrion | 73.61 | 76.85 |
| GSMUA_Achr8P22410_001 | Banana | golgi, mitochondrion | 70.95 | 74.59 |
| CDY11443 | Canola | cytosol | 9.76 | 74.58 |
| CDY22055 | Canola | mitochondrion | 72.51 | 72.83 |
| CDX90935 | Canola | mitochondrion | 72.06 | 72.38 |
| VIT_07s0005g00150.t01 | Wine grape | mitochondrion | 72.28 | 72.12 |
| Bra036262.1-P | Field mustard | mitochondrion | 73.17 | 71.43 |
| CDY18017 | Canola | mitochondrion | 52.99 | 71.34 |
| KRH37112 | Soybean | golgi, mitochondrion | 70.95 | 71.11 |
| AT4G02500.1 | Thale cress | mitochondrion | 72.51 | 70.93 |
| Bra000877.1-P | Field mustard | mitochondrion | 72.73 | 70.84 |
| Bra018545.1-P | Field mustard | mitochondrion | 72.28 | 70.56 |
| KRG96428 | Soybean | mitochondrion | 71.18 | 70.55 |
| CDY50378 | Canola | cytosol | 72.28 | 69.51 |
| Bra007696.1-P | Field mustard | mitochondrion | 69.62 | 68.86 |
| VIT_05s0020g01530.t01 | Wine grape | mitochondrion | 70.73 | 68.45 |
| AT3G62720.1 | Thale cress | mitochondrion | 69.62 | 68.26 |
| PGSC0003DMT400058812 | Potato | mitochondrion | 69.84 | 67.89 |
| CDX76657 | Canola | mitochondrion | 28.82 | 67.71 |
| CDY70090 | Canola | mitochondrion | 52.99 | 67.51 |
| CDX93965 | Canola | mitochondrion | 68.07 | 67.03 |
| Bra014396.1-P | Field mustard | mitochondrion | 68.07 | 66.88 |
| CDY70418 | Canola | golgi, mitochondrion | 68.07 | 66.74 |
| CDX97271 | Canola | mitochondrion | 39.25 | 65.8 |
| KRH12052 | Soybean | mitochondrion | 37.03 | 62.55 |
| CDY65940 | Canola | mitochondrion | 36.59 | 62.03 |
| KRH68171 | Soybean | golgi, mitochondrion | 30.82 | 57.68 |
| CDY11442 | Canola | cytosol, extracellular, mitochondrion, plastid | 10.42 | 55.29 |
| Solyc01g067930.2.1 | Tomato | mitochondrion | 23.73 | 50.95 |
| TraesCS6B01G221000.1 | Wheat | plastid | 52.55 | 49.58 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 48.78 | 49.44 |
| CDY11441 | Canola | mitochondrion | 20.62 | 49.21 |
| TraesCS7B01G352300.1 | Wheat | golgi | 46.78 | 48.62 |
| TraesCS4B01G184600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 46.78 | 47.2 |
| TraesCS6B01G315100.1 | Wheat | golgi, plasma membrane | 36.81 | 39.15 |
| TraesCS6B01G078800.1 | Wheat | plastid | 34.15 | 32.56 |
| TraesCS4B01G391200.1 | Wheat | endoplasmic reticulum | 34.37 | 32.36 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G188100.1 | EnsemblPlantsGene:TraesCS4B01G188100 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | InterPro:IPR029044 |
| InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF6 | PFAM:PF05637 | SEG:seg | TMHMM:TMhelix |
| MapMan:21.2.1.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:408975754..408977109
Molecular Weight (calculated)
52273.6 Da
IEP (calculated)
7.639
GRAVY (calculated)
-0.514
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MWVAERVLGE RRMREIQRFT RNAKLTIVCL MLTILVLRGT VGAGKFGTPQ QDLTELRHRF ISHPQRALSE HHDARSKASD AQAQAAQAAG KAAARDDEPE
101: PQPRSLRDPP YTLGPKISDW DEQRAAWNRR HPETPPFLND VKPRVMLVTG SSPKPCENPV GDHYLLKSIK NKIDYCRIHG LEIFYNMALL DAELAGFWAK
201: LPLLRALLLA HPEVEFFWWM DSDAMFTDMA FELPWERYGP YNFILHGWDE MVYDDKNWIG LNTGSFLLRN CQWSLDYLDT WAPMGPKGPV RIEAGKVLTK
301: YLKDRPVFEA DDQSAMVYIL ATQREKWGNK VYLENGYYLH GYWGILVDRY EEMLENYQPG LGDHRWPLVT HFVGCKPCSK FGDYPVERCL KQMDRAFNFG
401: DNQVLHMYGF EHKSLASRRI KRIRNETSDP LDMKDDYGLL HPAFKAVKTT T
101: PQPRSLRDPP YTLGPKISDW DEQRAAWNRR HPETPPFLND VKPRVMLVTG SSPKPCENPV GDHYLLKSIK NKIDYCRIHG LEIFYNMALL DAELAGFWAK
201: LPLLRALLLA HPEVEFFWWM DSDAMFTDMA FELPWERYGP YNFILHGWDE MVYDDKNWIG LNTGSFLLRN CQWSLDYLDT WAPMGPKGPV RIEAGKVLTK
301: YLKDRPVFEA DDQSAMVYIL ATQREKWGNK VYLENGYYLH GYWGILVDRY EEMLENYQPG LGDHRWPLVT HFVGCKPCSK FGDYPVERCL KQMDRAFNFG
401: DNQVLHMYGF EHKSLASRRI KRIRNETSDP LDMKDDYGLL HPAFKAVKTT T
001: MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V
Arabidopsis Description
XXT2Xyloglucan 6-xylosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:O22775]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.