Factsheet for TraesCS6B01G315100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G071920.1	Barley	golgi	92.92	92.27
TraesCS6D01G266700.1	Wheat	plastid	96.93	89.35
EES07343	Sorghum	golgi	78.77	75.39
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	77.36	73.87
Os02t0723200-01	Rice	mitochondrion	76.65	72.71
PGSC0003DMT400023470	Potato	endoplasmic reticulum	36.79	57.78
GSMUA_Achr3P30030_001	Banana	golgi	54.01	57.68
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	56.84	54.28
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.66	52.63
TraesCS6B01G078800.1	Wheat	plastid	58.49	52.43
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	58.49	51.77
Solyc03g043920.2.1	Tomato	golgi	50.47	51.69
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	53.54	50.56
PGSC0003DMT400055223	Potato	golgi	52.12	50.23
KRH28334	Soybean	plastid	53.07	49.78
Bra017847.1-P	Field mustard	golgi	50.94	49.32
CDY29577	Canola	golgi	50.71	49.09
CDX72649	Canola	golgi	50.47	48.86
VIT_00s0322g00030.t01	Wine grape	mitochondrion	38.92	48.1
AT4G37690.1	Thale cress	golgi	48.82	47.92
Bra039938.1-P	Field mustard	golgi, plastid	50.47	47.77
CDY49440	Canola	golgi	50.47	47.77
CDX76887	Canola	golgi, plastid	50.24	47.54
AT4G38310.1	Thale cress	nucleus	13.44	47.5
AT2G22900.1	Thale cress	plastid	50.24	47.44
TraesCS7B01G352300.1	Wheat	golgi	37.74	36.87
TraesCS4B01G188100.1	Wheat	golgi, mitochondrion	39.15	36.81
TraesCS1B01G115300.1	Wheat	golgi, mitochondrion	39.15	35.55
TraesCS4B01G184600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	37.03	35.12
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	35.61	33.93
TraesCS6B01G221000.1	Wheat	plastid	35.14	31.17

Protein Annotations

EnsemblPlants:TraesCS6B01G315100.1	EnsemblPlantsGene:TraesCS6B01G315100	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	PFAM:PF05637	SEG:seg	TMHMM:TMhelix
MapMan:21.2.3.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:563129821..563131095

Molecular Weight (calculated)

47478.0 Da

IEP (calculated)

7.553

GRAVY (calculated)

-0.334

Length

424 amino acids

Sequence
(BLAST)

001: MARSLLGDAL LFSAGAALGA LLLLTLASPF APPAVLLGRR SSSSAAAGDR RTFYDDPEVT YTVDRPITGW DEKRAQWLRA HPELAGAGEG RVLMVSGSQP
101: TPCRSPTGDH VLTRLLKNKA DYCRLNGVQL LYNTALLRPS MDRYWAKIPL IRAAMVAHPE AEWVWWVDSD AVLTDMDFRL PLRRYRGHNF VVNGWPSLVY
201: DEASPSWTGL NAGVFLVRNC QWSLDFMDAW AAMGPDSPDY RRWGAVLTST FKDKVFNESD DQSALVYMLQ HKGSPWRDKV FLENDYYFQG YWVEIVGRLG
301: DIAARYETME RRAPAALLRR RHAASWDHAA YAAAREAALA GAGLAESGVR GWRRPFVTHF TGCQPCSGDW NRDYSGDSCD DGMRRALNFA DDQVLRDYGF
401: RHAGPLSDDV RPLPFDYPAA AGRR

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.