Factsheet for TraesCS6D01G266700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	89.35	96.93
HORVU6Hr1G071920.1	Barley	golgi	86.96	93.68
EES07343	Sorghum	golgi	73.48	76.3
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	72.17	74.77
Os02t0723200-01	Rice	mitochondrion	71.09	73.15
GSMUA_Achr3P30030_001	Banana	golgi	49.35	57.18
PGSC0003DMT400023470	Potato	endoplasmic reticulum	33.26	56.67
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	53.48	55.41
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	28.48	53.04
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	49.57	50.78
Solyc03g043920.2.1	Tomato	golgi	45.65	50.72
KRH28334	Soybean	plastid	48.91	49.78
PGSC0003DMT400055223	Potato	golgi	47.39	49.55
Bra017847.1-P	Field mustard	golgi	46.52	48.86
CDY29577	Canola	golgi	46.3	48.63
CDX72649	Canola	golgi	46.09	48.4
Bra039938.1-P	Field mustard	golgi, plastid	46.74	47.99
CDY49440	Canola	golgi	46.74	47.99
VIT_00s0322g00030.t01	Wine grape	mitochondrion	35.65	47.81
CDX76887	Canola	golgi, plastid	46.52	47.77
AT2G22900.1	Thale cress	plastid	46.52	47.66
AT4G37690.1	Thale cress	golgi	44.57	47.45
AT4G38310.1	Thale cress	nucleus	12.17	46.67
TraesCS7D01G441500.1	Wheat	golgi	35.0	37.7
TraesCS4D01G189500.1	Wheat	golgi, mitochondrion	35.87	36.59
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	34.13	35.28
TraesCS4D01G185900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	34.13	35.12
TraesCS4D01G185800.1	Wheat	mitochondrion	33.48	33.41
TraesCS6D01G181200.1	Wheat	plastid	33.04	31.8

Protein Annotations

EnsemblPlants:TraesCS6D01G266700.1	EnsemblPlantsGene:TraesCS6D01G266700	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	PFAM:PF05637	SEG:seg	TMHMM:TMhelix
MapMan:21.2.3.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:376941044..376942426

Molecular Weight (calculated)

50947.3 Da

IEP (calculated)

8.831

GRAVY (calculated)

-0.333

Length

460 amino acids

Sequence
(BLAST)

001: MPSRRLRCAG STTAPRDGQR HRAALVRITG TGTGMARSLL GDALLFSAGA AVGAVLLLTL ASPFAPPAVL LGRRSSSAAG GGGDRRTFYD DPEVTYTVDR
101: PITGWDEKRA QWLRAHPELA GAGEGCVLMV SGSQPTPCRS PTGDHVLTRL LKNKADYCRL NGVQLLYNTA LLRPSMDRYW AKIPLIRAAM VAHPEAEWVW
201: WVDSDAVLTD MDFRLPLRRY RGHNLVVNGW PSLVYDEASP SWTGLNAGVF LVRNCQWSLD FMDAWAAMGP DSPDYRRWGA VLTSTFRDKV FNESDDQSAL
301: VYMLQHKGSP WRAKVFLEND YYFQGYWVEI VGRLGEIAAR YEAMERRAPA AALLRKRHAA SWDHAAYAAA REAALAGAGL AESGVRGWRR PFVTHFTGCQ
401: PCSGDRNRDY SGDSCDDGMR RALNFADDQV LRDYGFRHAG PLSDDVRPLP FDYPAAAGRR

Best Arabidopsis Sequence Match ( AT4G37690.1 )
(BLAST)

001: MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW

Arabidopsis Description

GT6Glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG1]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.