Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G120300.1 | Wheat | golgi | 91.32 | 97.23 |
| HORVU4Hr1G054020.3 | Barley | golgi | 88.94 | 94.25 |
| Os03t0306100-00 | Rice | golgi | 74.84 | 76.84 |
| Zm00001d039763_P001 | Maize | golgi, mitochondrion | 71.58 | 73.5 |
| EES00270 | Sorghum | golgi, mitochondrion | 71.58 | 72.85 |
| TraesCS4D01G185900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 60.52 | 62.42 |
| TraesCS7D01G441500.1 | Wheat | golgi | 56.83 | 61.36 |
| TraesCS4D01G189500.1 | Wheat | golgi, mitochondrion | 45.34 | 46.34 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 39.91 | 41.35 |
| TraesCS6D01G181200.1 | Wheat | plastid | 41.87 | 40.38 |
| TraesCS6D01G266700.1 | Wheat | plastid | 33.41 | 33.48 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G185800.1 | EnsemblPlantsGene:TraesCS4D01G185800 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | InterPro:IPR029044 |
| InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF9 | PFAM:PF05637 | SEG:seg | TMHMM:TMhelix |
| MapMan:21.2.1.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:323582282..323583667
Molecular Weight (calculated)
51617.8 Da
IEP (calculated)
6.573
GRAVY (calculated)
-0.227
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVKPSPMEG ACNARRRTAS LATDSMATVA EQHDGKPANG LRWRAHYGCP AAGSTTIPLV FLLLLTGALF LILGPTGSVL NLPSLRVVFS NPIHIAAAAP
101: PAPPPVAANV SDEDIGLPPP RQLTDPPYSL GRTILDYDAR RSAWLAAHPE FPARVPPAGR PRVLVVTGSA PARCPDPDGD HLLLRAFKNK ADYCRVHGLE
201: VYYNTAFLDA EMTGFWAKLP LLRSLMMAHP EVELLWWVDS DAVFTDMRFE LPWERYAAHN LVLHGWEAKV YEEKSWVGVN TGSILIRNCQ WSLDLLHAMA
301: PMGPRGPVRD RYGELFAREL SGRPPFEADD QSALIYLLVT QRERWGDKVF FENSYELNGF WELIVDRYEE LRRTGAWPLV THFVGCKPCR RYADSYPADR
401: CRLGMERAFN FADDQILRLY GFGHESLNGT AVQRVRNETG GPLDAEDEEL GRLLHPTFRA T
101: PAPPPVAANV SDEDIGLPPP RQLTDPPYSL GRTILDYDAR RSAWLAAHPE FPARVPPAGR PRVLVVTGSA PARCPDPDGD HLLLRAFKNK ADYCRVHGLE
201: VYYNTAFLDA EMTGFWAKLP LLRSLMMAHP EVELLWWVDS DAVFTDMRFE LPWERYAAHN LVLHGWEAKV YEEKSWVGVN TGSILIRNCQ WSLDLLHAMA
301: PMGPRGPVRD RYGELFAREL SGRPPFEADD QSALIYLLVT QRERWGDKVF FENSYELNGF WELIVDRYEE LRRTGAWPLV THFVGCKPCR RYADSYPADR
401: CRLGMERAFN FADDQILRLY GFGHESLNGT AVQRVRNETG GPLDAEDEEL GRLLHPTFRA T
001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
Arabidopsis Description
XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.