Factsheet for Zm00001d039763_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00270	Sorghum	golgi, mitochondrion	89.31	88.52
TraesCS4A01G120300.1	Wheat	golgi	73.72	76.44
HORVU4Hr1G054020.3	Barley	golgi	72.61	74.94
Os03t0306100-00	Rice	golgi	74.61	74.61
TraesCS4D01G185800.1	Wheat	mitochondrion	73.5	71.58
Zm00001d047647_P001	Maize	mitochondrion	59.02	71.43
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	36.3	61.51
Zm00001d028874_P001	Maize	golgi	59.91	59.12
Zm00001d025851_P001	Maize	cytosol	42.76	53.04
Zm00001d051264_P001	Maize	mitochondrion, plastid	46.33	52.39
Zm00001d028811_P001	Maize	plasma membrane	48.11	48.32
Zm00001d047694_P001	Maize	golgi	47.88	47.99
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	29.4	47.65
Zm00001d023399_P001	Maize	golgi, mitochondrion	47.88	47.15
Zm00001d023417_P001	Maize	golgi, mitochondrion	47.66	46.93
Zm00001d047657_P001	Maize	mitochondrion	18.26	46.07
Zm00001d047654_P001	Maize	golgi, plasma membrane	21.38	45.93
Zm00001d016687_P001	Maize	plasma membrane	45.88	43.1
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	17.82	41.45
Zm00001d052625_P001	Maize	plastid	36.75	37.41
Zm00001d043041_P001	Maize	nucleus	24.5	37.29
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	35.86	36.26
Zm00001d023398_P001	Maize	mitochondrion	40.98	35.87
Zm00001d052628_P001	Maize	plasma membrane	36.75	34.45
Zm00001d052627_P001	Maize	plastid	34.97	34.28
Zm00001d023418_P001	Maize	nucleus	40.98	17.85

Protein Annotations

EnsemblPlants:Zm00001d039763_P001	EnsemblPlants:Zm00001d039763_T001	EnsemblPlantsGene:Zm00001d039763	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF9	PFAM:PF05637	ProteinID:ONM29897.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00084479A1	UniProt:A0A1D6ML09	MapMan:21.2.1.1.2	:

Description

Xyloglucan 6-xylosyltransferase 2

Coordinates

chr3:+:14143865..14145214

Molecular Weight (calculated)

50767.2 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.355

Length

449 amino acids

Sequence
(BLAST)

001: MREHLQYCNK LVGTRRHYRR CAPATPHIAV AILLIALGVL YLAFSPTNSD LNLVLSMPRV HVVFNDEPVR KVAPVAAAPA PGNATDDDED SGLPPPRQLT
101: DPPYSLGRAI LDYDARRSAW LAAHPELPAR VGRRPRVLVV TGSAPARCPD ADGDHLLLRA FKNKADYCRV HGLDVFYNAA FLDAEMSGFW AKLPLLRALM
201: LAHPEVELLW WVDSDAVFTD MAFEPPWERY ARHNLVLHGW AAKVFEERSW VGINTGSFLI RNCQWSLDLL DAWAPMGSRG PVRDRYGELF ARELSGRPPF
301: EADDQSALVY LLVTQRGRWG DKTFIESTYE LNGFWEGIVD RYEEMRRKGR PTGGLGDDRW PFVTHFVGCK PCRRYADSYP ADRCRRGMER AFNFADDQIL
401: RLYGFEHESF NTTAVQRVGN ETGGPLDADD DELGRLLHPT FRAATPTQT

Best Arabidopsis Sequence Match ( AT1G74380.1 )
(BLAST)

001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

Arabidopsis Description

XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.