Factsheet for Zm00001d023398_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016687_P001	golgi
Zm00001d023398_P001	golgi
Zm00001d023399_P001	golgi
Zm00001d023417_P001	golgi
Zm00001d023418_P001	golgi
Zm00001d043041_P001	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74380.1	Zm00001d016687_P001	AT1G74380.1	22665445
AT1G74380.1	Zm00001d023398_P001	AT1G74380.1	22665445
AT1G74380.1	Zm00001d023399_P001	AT1G74380.1	22665445
AT1G74380.1	Zm00001d023417_P001	AT1G74380.1	22665445
AT1G74380.1	Zm00001d023418_P001	AT1G74380.1	22665445
AT1G74380.1	Zm00001d043041_P001	AT1G74380.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15672	Sorghum	mitochondrion	83.63	83.3
Zm00001d043041_P001	Maize	nucleus	47.56	82.71
TraesCS5A01G129800.1	Wheat	mitochondrion	49.71	57.3
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	49.51	57.08
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	49.12	56.88
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	49.32	56.85
CDX68187	Canola	cytosol	24.56	56.5
CDX85826	Canola	cytosol	24.56	56.5
CDX73082	Canola	cytosol	24.37	56.31
CDX96540	Canola	cytosol	24.37	56.31
Os12t0149300-01	Rice	golgi	51.07	56.22
Bra008146.1-P	Field mustard	cytosol	23.98	55.16
CDY49114	Canola	peroxisome	15.01	55.0
Zm00001d023417_P001	Maize	golgi, mitochondrion	47.56	53.51
Zm00001d023399_P001	Maize	golgi, mitochondrion	47.56	53.51
PGSC0003DMT400073000	Potato	cytosol	24.56	52.28
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	26.51	51.32
Zm00001d016687_P001	Maize	plasma membrane	46.59	50.0
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	43.27	49.33
GSMUA_Achr10P...	Banana	cytosol	41.72	49.31
KRH03516	Soybean	mitochondrion	42.88	49.22
KRH56886	Soybean	endoplasmic reticulum	42.88	49.22
Bra015915.1-P	Field mustard	plastid	43.08	48.46
Solyc03g115740.1.1	Tomato	plastid	42.3	48.22
AT5G07720.1	Thale cress	cytosol, plastid	42.88	48.14
PGSC0003DMT400063414	Potato	plastid	42.11	48.0
AT1G74380.1	Thale cress	plastid	42.69	47.92
Bra003804.1-P	Field mustard	plastid	42.69	47.92
CDX99024	Canola	cytosol, golgi, peroxisome, plastid	41.91	47.36
CDX69995	Canola	cytosol	41.91	47.25
Bra009305.1-P	Field mustard	cytosol	41.91	47.25
CDY19235	Canola	cytosol, golgi, plasma membrane, plastid	41.52	47.12
PGSC0003DMT400041333	Potato	plastid	41.52	46.92
GSMUA_Achr3P22760_001	Banana	cytosol	41.91	46.84
Zm00001d023418_P001	Maize	nucleus	92.01	45.78
Zm00001d047647_P001	Maize	mitochondrion	32.94	45.55
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	42.5	45.23
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	39.38	45.19
Zm00001d051264_P001	Maize	mitochondrion, plastid	34.31	44.33
Zm00001d025851_P001	Maize	cytosol	30.99	43.92
GSMUA_Achr10P...	Banana	plastid	42.88	43.65
Zm00001d028811_P001	Maize	plasma membrane	38.01	43.62
Zm00001d047694_P001	Maize	golgi	38.01	43.53
GSMUA_Achr11P...	Banana	cytosol	43.08	43.5
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	41.91	42.74
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	15.59	41.45
AT1G18690.4	Thale cress	golgi, plastid	41.13	41.13
Zm00001d039763_P001	Maize	golgi, mitochondrion	35.87	40.98
Zm00001d028874_P001	Maize	golgi	33.72	38.02
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	29.43	34.01
Zm00001d052625_P001	Maize	plastid	28.27	32.88
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	17.74	32.85
Zm00001d052628_P001	Maize	plasma membrane	29.24	31.32
Zm00001d047657_P001	Maize	mitochondrion	10.53	30.34
Zm00001d047654_P001	Maize	golgi, plasma membrane	12.28	30.14
Zm00001d052627_P001	Maize	plastid	26.51	29.69

Protein Annotations

EntrezGene:103642270	Gene3D:3.90.550.10	MapMan:35.1	ProteinID:AQK39268.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	UniProt:K7TEK8	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF8
TMHMM:TMhelix	UniParc:UPI0002217105	EnsemblPlantsGene:Zm00001d023398	EnsemblPlants:Zm00001d023398_P001	EnsemblPlants:Zm00001d023398_T001	SEG:seg

Description

Probable xyloglucan 6-xylosyltransferase 5

Coordinates

chr10:+:4725305..4726846

Molecular Weight (calculated)

57599.0 Da

IEP (calculated)

9.024

GRAVY (calculated)

-0.561

Length

513 amino acids

Sequence
(BLAST)

001: MRTPAAGGWR LHPRGSSSSK LTRRIISNVK ITLLCAFVTL LVLRGTVGVN RRLVYIAGSP DNRADSATAT ATGSARPVED VERILREIRA DSDDDPDAGP
101: DDNDEAPTST SSSAATGHHY DRGAAWTTTN YRLQPRVTRW NAKRRRWLHQ NPGFPSRDAR GGPRVLLVTA SPQGPCGSSD GDRFLLRATK NRLDYCRLHG
201: VEMVHATARL EDPELRSAGD GNGWAKLALL RRLMLAHPEV EWLWWLDAGA LVTDMGFELP LARYEGAHLV VRGDSYQLFQ RRAWDAASTA SFLLRNCQWS
301: LDLLDAWTVM APRGRARYDA GALLTATLAG RRAGEADDQS ALVHLLVTEK ERWMDRVYLE NQYYLHGVWT ALVGKYEEAM EKHHPGYGDD RWPFVTNFAG
401: CNPCDDGKNC SDEYPLDRCA SGMERAFNFA DNQVLRLYGF RHESLASAEV RRVANRSTDP LEAKEEALAF LKKPNEPDLW SNDVRKNRKR KGKGDLDSVL
501: ARILRRLGWR SKC

Best Arabidopsis Sequence Match ( AT1G18690.1 )
(BLAST)

001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP

Arabidopsis Description

XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.